Detail information of GWHGAAEX003904/evm.TU.scaffold_141.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|328950651|ref|YP_004367986.1|5.00E-50hypothetical protein Marky_1135 [Marinithermus hydrothermalis DSM 14884]
KOGKOG32991.00E-93Uncharacterized conserved protein
nrgi|695058580|ref|XP_009417609.1|8.56E-118PREDICTED: uncharacterized protein LOC103997979 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0U0H0|M0U0H0_MUSAM1.00E-118Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P15120_001}
TAIRAT4G380901.00E-93Ribosomal protein S5 domain 2-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001371467256596-
Transcript Sequence

Network for GWHGAAEX003904

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01205.18UPF0029621622.40E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.850
SRR2545915Juvenile tuber37.220
SRP108465SRR5643513five period of Gastrodia elata27.910
SRR5643514five period of Gastrodia elata27.740
SRR5643515five period of Gastrodia elata26.230
SRR5643524five period of Gastrodia elata22.910
SRR5643525five period of Gastrodia elata21.390
SRR5643528five period of Gastrodia elata18.130
SRR5643658five period of Gastrodia elata16.850
SRR5643659five period of Gastrodia elata32.130
SRR5643660five period of Gastrodia elata38.050
SRR5643661five period of Gastrodia elata31.560
SRR5643662five period of Gastrodia elata38.810
SRR5643663five period of Gastrodia elata36.590
SRR5643664five period of Gastrodia elata42.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.720
SRR6049655Rhizomagastrodiae_C368-T10_good_118.850
SRR6049656Rhizomagastrodiae_C368-T07_good_127.190
SRR6049657Rhizomagastrodiae_C368-T07_good_137.420
SRR6049658Rhizomagastrodiae_C368-T04_good_141.220
SRR6049659Rhizomagastrodiae_C368-T04_good_150.120
SRR6049660Rhizomagastrodiae_C368-T01_good_140.850
SRR6049661Rhizomagastrodiae_C368-T04_good_140.750
SRR6049662Rhizomagastrodiae_C368-T01_good_129.810
SRR6049663Rhizomagastrodiae_C368-T01_good_132.550
SRR6049664Rhizomagastrodiae_C368-T10_good_129.850
SRR6049665Rhizomagastrodiae_C368-T10_good_129.850
SRP279888GastroGastrodia elata tuber 49.04
JuvenJuvenile tuber41.59
Mother_GastroMother tuber of Gastrodia elata 42.06
Mother_JuvenMother tuber of Juvenile 29.33