Detail information of GWHGAAEX003907/evm.TU.scaffold_141.11


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26729.00E-29Lipoate synthase
nrgi|672173108|ref|XP_008806674.1|1.62E-32PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like [Phoenix dactylifera]
Swissprottr|P80680|FTRV_MAIZE2.00E-33Ferredoxin-thioredoxin reductase, variable chain
trEMBLtr|A2XVR8|A2XVR8_ORYSI3.00E-32Putative uncharacterized protein {ECO:0000313|EMBL:EAY94928.1}
TAIRAT5G084109.00E-29ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000137666916673747+
Transcript Sequence

Network for GWHGAAEX003907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02941.14FeThRed_A771491.60E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015979Biological Processphotosynthesis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.050
SRR2545915Juvenile tuber21.710
SRP108465SRR5643513five period of Gastrodia elata35.220
SRR5643514five period of Gastrodia elata42.800
SRR5643515five period of Gastrodia elata38.840
SRR5643524five period of Gastrodia elata41.710
SRR5643525five period of Gastrodia elata96.570
SRR5643528five period of Gastrodia elata64.390
SRR5643658five period of Gastrodia elata66.470
SRR5643659five period of Gastrodia elata41.740
SRR5643660five period of Gastrodia elata40.530
SRR5643661five period of Gastrodia elata42.280
SRR5643662five period of Gastrodia elata45.310
SRR5643663five period of Gastrodia elata41.830
SRR5643664five period of Gastrodia elata47.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.030
SRR6049655Rhizomagastrodiae_C368-T10_good_138.410
SRR6049656Rhizomagastrodiae_C368-T07_good_130.760
SRR6049657Rhizomagastrodiae_C368-T07_good_130.470
SRR6049658Rhizomagastrodiae_C368-T04_good_137.630
SRR6049659Rhizomagastrodiae_C368-T04_good_142.980
SRR6049660Rhizomagastrodiae_C368-T01_good_134.700
SRR6049661Rhizomagastrodiae_C368-T04_good_136.830
SRR6049662Rhizomagastrodiae_C368-T01_good_134.970
SRR6049663Rhizomagastrodiae_C368-T01_good_135.390
SRR6049664Rhizomagastrodiae_C368-T10_good_143.760
SRR6049665Rhizomagastrodiae_C368-T10_good_143.760
SRP279888GastroGastrodia elata tuber 76.46
JuvenJuvenile tuber49.23
Mother_GastroMother tuber of Gastrodia elata 86.16
Mother_JuvenMother tuber of Juvenile 63.14