Detail information of GWHGAAEX003908/evm.TU.scaffold_141.16


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410668843|ref|YP_006921214.1|9.00E-28serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
KOGKOG00322.00E-163Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|672142681|ref|XP_008795200.1|0PREDICTED: serine/threonine-protein kinase PEPKR2-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q8W490|PEPK2_ARATH6.00E-164Serine/threonine-protein kinase PEPKR2
trEMBLtr|M0TSZ7|M0TSZ7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P23440_001}
TAIRAT1G126802.00E-163phosphoenolpyruvate carboxylase-related kinase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013710911721101417+
Transcript Sequence

Network for GWHGAAEX003908

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase983461.40E-67
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.560
SRR2545915Juvenile tuber12.650
SRP108465SRR5643513five period of Gastrodia elata21.370
SRR5643514five period of Gastrodia elata19.030
SRR5643515five period of Gastrodia elata20.430
SRR5643524five period of Gastrodia elata17.590
SRR5643525five period of Gastrodia elata27.420
SRR5643528five period of Gastrodia elata22.620
SRR5643658five period of Gastrodia elata23.360
SRR5643659five period of Gastrodia elata16.870
SRR5643660five period of Gastrodia elata16.800
SRR5643661five period of Gastrodia elata19.660
SRR5643662five period of Gastrodia elata18.080
SRR5643663five period of Gastrodia elata19.590
SRR5643664five period of Gastrodia elata15.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.910
SRR6049655Rhizomagastrodiae_C368-T10_good_115.280
SRR6049656Rhizomagastrodiae_C368-T07_good_115.740
SRR6049657Rhizomagastrodiae_C368-T07_good_116.200
SRR6049658Rhizomagastrodiae_C368-T04_good_116.570
SRR6049659Rhizomagastrodiae_C368-T04_good_116.960
SRR6049660Rhizomagastrodiae_C368-T01_good_117.570
SRR6049661Rhizomagastrodiae_C368-T04_good_118.200
SRR6049662Rhizomagastrodiae_C368-T01_good_117.810
SRR6049663Rhizomagastrodiae_C368-T01_good_117.350
SRR6049664Rhizomagastrodiae_C368-T10_good_117.910
SRR6049665Rhizomagastrodiae_C368-T10_good_117.910
SRP279888GastroGastrodia elata tuber 15.81
JuvenJuvenile tuber22.33
Mother_GastroMother tuber of Gastrodia elata 33.18
Mother_JuvenMother tuber of Juvenile 32.84