Detail information of GWHGAAEX003912/evm.TU.scaffold_141.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428308489|ref|YP_007119466.1|1.00E-09valyl-tRNA synthetase [Microcoleus sp. PCC 7113]
nrgi|743859253|ref|XP_010942657.1|5.25E-42PREDICTED: LOW QUALITY PROTEIN: protein CURVATURE THYLAKOID 1D, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q8LDD3|CUT1D_ARATH2.00E-30Protein CURVATURE THYLAKOID 1D, chloroplastic (Precursor)
trEMBLtr|M0TH23|M0TH23_MUSAM2.00E-34Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P12860_001}
TAIRAT4G381002.00E-29Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013720730112081095+
Transcript Sequence

Network for GWHGAAEX003912

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14159.5CAAD1031784.60E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.760
SRR2545915Juvenile tuber39.510
SRP108465SRR5643513five period of Gastrodia elata33.060
SRR5643514five period of Gastrodia elata39.950
SRR5643515five period of Gastrodia elata28.660
SRR5643524five period of Gastrodia elata38.530
SRR5643525five period of Gastrodia elata36.560
SRR5643528five period of Gastrodia elata34.670
SRR5643658five period of Gastrodia elata40.670
SRR5643659five period of Gastrodia elata25.570
SRR5643660five period of Gastrodia elata29.050
SRR5643661five period of Gastrodia elata33.550
SRR5643662five period of Gastrodia elata30.050
SRR5643663five period of Gastrodia elata27.610
SRR5643664five period of Gastrodia elata28.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.740
SRR6049655Rhizomagastrodiae_C368-T10_good_121.960
SRR6049656Rhizomagastrodiae_C368-T07_good_123.810
SRR6049657Rhizomagastrodiae_C368-T07_good_118.690
SRR6049658Rhizomagastrodiae_C368-T04_good_122.230
SRR6049659Rhizomagastrodiae_C368-T04_good_120.790
SRR6049660Rhizomagastrodiae_C368-T01_good_121.150
SRR6049661Rhizomagastrodiae_C368-T04_good_116.680
SRR6049662Rhizomagastrodiae_C368-T01_good_121.880
SRR6049663Rhizomagastrodiae_C368-T01_good_122.440
SRR6049664Rhizomagastrodiae_C368-T10_good_129.780
SRR6049665Rhizomagastrodiae_C368-T10_good_129.780
SRP279888GastroGastrodia elata tuber 37.68
JuvenJuvenile tuber54.71
Mother_GastroMother tuber of Gastrodia elata 35.06
Mother_JuvenMother tuber of Juvenile 29.63