Detail information of GWHGAAEX003916/evm.TU.scaffold_141.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02511.00E-42Clathrin assembly protein AP180 and related proteins, contain ENTH domain
nrgi|719968833|ref|XP_010266629.1|1.11E-45PREDICTED: putative clathrin assembly protein At4g40080 [Nelumbo nucifera]
Swissprottr|Q8L936|CAP16_ARATH4.00E-43Putative clathrin assembly protein At4g40080
trEMBLtr|A0A068TZ39|A0A068TZ39_COFCA2.00E-43Coffea canephora
TAIRAT4G400801.00E-42ENTH/ANTH/VHS superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013724748632476521-
Transcript Sequence

Network for GWHGAAEX003916

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07651.15ANTH351601.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005543Molecular Functionphospholipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.730
SRR2545915Juvenile tuber5.520
SRP108465SRR5643513five period of Gastrodia elata17.550
SRR5643514five period of Gastrodia elata12.370
SRR5643515five period of Gastrodia elata19.900
SRR5643524five period of Gastrodia elata17.060
SRR5643525five period of Gastrodia elata27.730
SRR5643528five period of Gastrodia elata33.830
SRR5643658five period of Gastrodia elata28.880
SRR5643659five period of Gastrodia elata17.790
SRR5643660five period of Gastrodia elata13.500
SRR5643661five period of Gastrodia elata23.740
SRR5643662five period of Gastrodia elata17.900
SRR5643663five period of Gastrodia elata16.310
SRR5643664five period of Gastrodia elata13.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.860
SRR6049655Rhizomagastrodiae_C368-T10_good_114.710
SRR6049656Rhizomagastrodiae_C368-T07_good_17.600
SRR6049657Rhizomagastrodiae_C368-T07_good_19.920
SRR6049658Rhizomagastrodiae_C368-T04_good_15.090
SRR6049659Rhizomagastrodiae_C368-T04_good_15.190
SRR6049660Rhizomagastrodiae_C368-T01_good_14.860
SRR6049661Rhizomagastrodiae_C368-T04_good_16.280
SRR6049662Rhizomagastrodiae_C368-T01_good_15.810
SRR6049663Rhizomagastrodiae_C368-T01_good_13.860
SRR6049664Rhizomagastrodiae_C368-T10_good_19.910
SRR6049665Rhizomagastrodiae_C368-T10_good_19.910
SRP279888GastroGastrodia elata tuber 4.11
JuvenJuvenile tuber12.51
Mother_GastroMother tuber of Gastrodia elata 80.15
Mother_JuvenMother tuber of Juvenile 60.25