Detail information of GWHGAAEX003921/evm.TU.scaffold_142.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|11499645|ref|NP_070887.1|1.00E-06prefoldin subunit alpha [Archaeoglobus fulgidus DSM 4304]
KOGKOG30472.00E-39Predicted transcriptional regulator UXT
nrgi|695001345|ref|XP_009415769.1|4.62E-80PREDICTED: protein UXT homolog [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S2Q3|M0S2Q3_MUSAM2.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P24460_001}
TAIRAT1G26660_12.00E-39Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014084995102564+
Transcript Sequence

Network for GWHGAAEX003921

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02996.16Prefoldin291422.90E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0051082Molecular Functionunfolded protein binding
GO:0016272Cellular Componentprefoldin complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.070
SRR2545915Juvenile tuber14.190
SRP108465SRR5643513five period of Gastrodia elata11.770
SRR5643514five period of Gastrodia elata12.530
SRR5643515five period of Gastrodia elata12.330
SRR5643524five period of Gastrodia elata11.690
SRR5643525five period of Gastrodia elata17.310
SRR5643528five period of Gastrodia elata22.010
SRR5643658five period of Gastrodia elata20.590
SRR5643659five period of Gastrodia elata13.000
SRR5643660five period of Gastrodia elata10.940
SRR5643661five period of Gastrodia elata12.070
SRR5643662five period of Gastrodia elata7.890
SRR5643663five period of Gastrodia elata8.870
SRR5643664five period of Gastrodia elata7.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.840
SRR6049655Rhizomagastrodiae_C368-T10_good_18.290
SRR6049656Rhizomagastrodiae_C368-T07_good_17.490
SRR6049657Rhizomagastrodiae_C368-T07_good_17.970
SRR6049658Rhizomagastrodiae_C368-T04_good_14.210
SRR6049659Rhizomagastrodiae_C368-T04_good_13.450
SRR6049660Rhizomagastrodiae_C368-T01_good_14.400
SRR6049661Rhizomagastrodiae_C368-T04_good_14.420
SRR6049662Rhizomagastrodiae_C368-T01_good_16.190
SRR6049663Rhizomagastrodiae_C368-T01_good_15.810
SRR6049664Rhizomagastrodiae_C368-T10_good_18.460
SRR6049665Rhizomagastrodiae_C368-T10_good_18.460
SRP279888GastroGastrodia elata tuber 7.37
JuvenJuvenile tuber13.10
Mother_GastroMother tuber of Gastrodia elata 11.08
Mother_JuvenMother tuber of Juvenile 11.10