Detail information of GWHGAAEX003933/evm.TU.scaffold_142.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392402696|ref|YP_006439308.1|7.00E-20putative transcriptional regulator, Crp/Fnr family [Turneriella parva DSM 21527]
KOGKOG04985.00E-151K+-channel ERG and related proteins, contain PAS/PAC sensor domain
nrgi|743865901|ref|XP_010904936.1|0PREDICTED: cyclic nucleotide-gated ion channel 2-like [Elaeis guineensis]
Swissprottr|O65718|CNGC2_ARATH1.00E-151Cyclic nucleotide-gated ion channel 2
trEMBLtr|M0T537|M0T537_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P07880_001}
TAIRAT5G154105.00E-151Cyclic nucleotide-regulated ion channel family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000140898119899962-
Transcript Sequence

Network for GWHGAAEX003933

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05391CNGC Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.990
SRR2545915Juvenile tuber7.100
SRP108465SRR5643513five period of Gastrodia elata5.980
SRR5643514five period of Gastrodia elata6.500
SRR5643515five period of Gastrodia elata7.320
SRR5643524five period of Gastrodia elata8.680
SRR5643525five period of Gastrodia elata2.380
SRR5643528five period of Gastrodia elata3.510
SRR5643658five period of Gastrodia elata1.740
SRR5643659five period of Gastrodia elata6.810
SRR5643660five period of Gastrodia elata8.040
SRR5643661five period of Gastrodia elata5.980
SRR5643662five period of Gastrodia elata7.120
SRR5643663five period of Gastrodia elata8.810
SRR5643664five period of Gastrodia elata7.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.890
SRR6049655Rhizomagastrodiae_C368-T10_good_18.520
SRR6049656Rhizomagastrodiae_C368-T07_good_18.040
SRR6049657Rhizomagastrodiae_C368-T07_good_15.510
SRR6049658Rhizomagastrodiae_C368-T04_good_16.190
SRR6049659Rhizomagastrodiae_C368-T04_good_13.200
SRR6049660Rhizomagastrodiae_C368-T01_good_14.830
SRR6049661Rhizomagastrodiae_C368-T04_good_17.580
SRR6049662Rhizomagastrodiae_C368-T01_good_113.350
SRR6049663Rhizomagastrodiae_C368-T01_good_15.270
SRR6049664Rhizomagastrodiae_C368-T10_good_120.620
SRR6049665Rhizomagastrodiae_C368-T10_good_120.620
SRP279888GastroGastrodia elata tuber 6.10
JuvenJuvenile tuber12.75
Mother_GastroMother tuber of Gastrodia elata 4.17
Mother_JuvenMother tuber of Juvenile 5.43