Gene detail

Detail information of GWHGAAEX003945/evm.TU.scaffold_142.42

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4722	4.00E-25	Zn-finger protein
nr	gi\|743837284\|ref\|XP_010936354.1\|	0	PREDICTED: uncharacterized protein LOC105055995 isoform X2 [Elaeis guineensis]
trEMBL	tr\|B9RLS8\|B9RLS8_RICCO	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EEF47803.1}
TAIR	HS16507198	4.00E-25	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000140	1769345	1826283	-

Transcript Sequence
>GWHTAAEX003945 GGAAGCGTCATTGAACTTTAACCTGTTCGTTTTTTAAAAGAAGAGTGCGGAAAAATTCCTTTTTGATTTCCACCCTGAACGTGAATGTATCCTTTTGATATTGAACTGTTTTGATCCCGGAGACATGATTCAATCGAGACCTTATCAATCCTCGACTTCGCGCTCTAGCATATAGAGTTTAAGGGGTTTGGGGAAAATGCATGTTTCTGTGGCGCCGTCGAAGAGACTGTTTTCTTGGTAAAATTGGCTGCGTTTGGTGATGGATAAGGAGTTAGGAACTGACGATGATCAAAGTTCTGGATGGCATGAAGTGAGGAAGAAGCACAGAACAAATTCGAAGATCTCCATCCAAAAGACTTCTGGAGAGCCTAACAAAAGAATACACTTAAGCTCACGGCACAACCAGGCTTTGAAAAATGATAAAATTTTAGAAGCTTCTACTGTACAAGGCGGATCTCTTAAACGAAGTAGATTAAAAAATGTTGATTCAAATGTTTCTGTTGCTGCATTGAATGTAACTAAAAACGATACAGAACTAGAAATGTTGGGTGGACTTCCCAAAATCAAGTGGGGCAATATTGAGGATGCTTCTTTTGCAGTATCAGTATCTGGAGATTCAGGCAATACAAAGACTGATGAAAATGCACATTTCGCAAGTTGTGGCCTCCAGAAAGAGCAGACTTTTGCTGCAGATGCTAATTTAGATGTATTTGTATTCTCCTCTAACTATGCTCAAGATGATGATGCCACATCAGAAAATGCAGAAGAGTCTCTTATAGAAACTTGTGGGGAGGTTTGTGAGGTTTCTTCCAAATACAAGGACATCACAAATATTGAATTAAAAAATTCATCCAATAATTTTAAAGAAAAATTTAGAGTTAGTATTATGCAAAATGAAAATTTGAATGGATTGGCTTCTGAAGATGTAGATGTTGAGAGCTCTTCACCTTCTTCCAATGTTGAAGTTGCTGAAACTAATTCTGAGAAGTACATTGACAAATCCAATGTCTCTGAAGTGTCTGCTGTTAGCAATGTTTCTGTGGTGAATAATAGTAGTCCTCTACATAATTTACATGTGAGCAAAAATAGTAGTGCTAAAGTTTCTGCTGATTCTCTCACTTCCAATGAAGATGTTTTGTCAGATGGGCCTGATAAAGGAGAAGATGACCATATTGAGGGGAAAGAAAGGTTTAGGGAGAGGCTTTGGTGCTTTCTGTTTGAAAATATGAATAGAGCAGTTGATGAACTCTATCTTCTTTGTGAGTTAGAATGTGATAGAGAGCAGATGAACGAGGTTATCCTTGTTCTAGAAGAAGCTATATCTGATTTTAGAGAACTTAAATGTAGAGTTGAAAATTTTGAGGGCACCAAGAGATCTGCTGCTCAATCTTCCAAAGATATGGCAGTGGCAAGTTTAAAGACCGAGCATAGGCGACCTCATGCTTTATCATGGGAGGTCAGACGAATGACAACTTCACCTCACAGAGCGGAAATATTATCTTCATCTCTTGAGGCTTTCAGAAAAATTCAAATGGAAAGAGCTAGCAAACATGCAACTCATGATGGAAAGGACATGATCTTTCCTCTTTCAAACATGCAGAACTGTTCTGAAAAATCACTTAGAGGAAACGAAAAGCATTCAAATGGACGAAAACAAAGCTCCAGCTCAGAAATTAAAAGGATGGATGCCATTCATGAAAAGTCCATAAAATATAAAGCAGATTCGGCAGCATCTTCACTTGATAGATCATGTTCGGTACAAGCCGGTATTTTAACTTCAGAAAATCTCTTAATTTCTGCTTCTGGGAAGTGGAAGAAAGAACCGCTTGAAACAATTTTAGAATTTGAAAACCAGGCTTCTAAGAAGGACAAATTGTTGCCTACTAACCGAATAGAAAAACAATCAAATGCCTTAGATATGATAAAAAGAAACAACTCTCTAGGTATCAAAGAAAAAGAAAAGGATAAGTGGAATGCTGTTCCATGGAAATCCATGGATGCATGGAAGGAAAAAAGGAACTGGGAGGATATTCTAAAATCTCCAGTGAGAAGCTCTTCACGACTATCTTGTTCACCTGGTGTAGGTAGAAAGAGTGTAGAGCGAGCAAAAGTGTTGCATGATAAGTTAATGTCTCCTGAGAAAAAGAAAAAGAGTGCTTTGGATATGAGGAAAGAAGCAGAAGAAAGGCATGCAAGGGCATTGAGAATTAGAGGCCAATTGGAAAATGAGAGATTGCAAAGGCTGCAACGTGTCTCAGAGAAATTCAATCGCGTTAATGAATGGCAGGCTGTTCGTAGTTTAAAGCTTCGGGAGGGACTCAATGCTCGGCAGCAACGTAGTGAATCCCGCCATGAGGCATATCTAGCCCAAGTAGTGAAAAGAGCTGGTGATGAGAGTAGTAAAGTTAATGAGGTTCGTTTTATTACTACATTAAACGAAGAGAATAAAAAGTTAATACTTCGACAAAAACTTCATGATTCAGAATTGAGAAGAGCTGAAAAAATGCAGACAATTAAAATAAAACAGAAAGAGGACTCAGCAAGAGAGGAAGCTGCACTCGAACGAAGGAAACTTCTTGAAGCCGAAAAAATGCAGCGTCTTGCTGAGATACAAAGGAAGAAAGAAGAAGCTCAACTAAGAAGGGAAGAAGAGAGAAAGGCTTCTAGTGCTGCTAGGGAAGCTAAGGCAGTGGAGCAACTTCGCAGAAAGGAAATTAGAGCCAAAGCTCAGTTGGAGGAAGCAGAGCTTTTAGCCCAGAAGCTAGCTGAAAAGTTGAGTGAAAGTGAACAACGTCGGAAGTTTTACTTGGAGCAAATTCGTGAAAAAGCATCTACAGATTTTAAGGACCAATCTTCTCCTTTGCTGCGCCGGTCTGTAAACAGAGAGGGCCTGGGTCGACACATAACAGCTCCTTATGTTGAAGATAACCAGACAGCAGCATGTGTTCCTGTTGTTGGATATTCAGTGCCTGGATTTTCCTACCCTGAACAGCAACAATCGTTGAAACGAAGAATAAAAAGAATCCGGCAAAGGCTAATGGCTCTCAAGCATGACTTTATTGAGCCTCCATTTTTTGCTGAAAATTTAGGTTTTGGTTATAGAACCCTAATCGGAACTGCTAGGGCAAAAATTGGGAAATGGCTTCAGGAACTTCAGAGGCTTCGTCAGGCTCGAAAGGAAGGAGCTGTAAGTATTGGATTGATTGTCAGCGATATGATAAAGTTCTTGGAGGGCAAAGACATTGAGCTTTATGTATCTCGGCAAGCAGGTTTGCTTGATTTCATATCTTCTGCACTACCTGCCTCTCATACATCAAAACCCGAGTCTGGTCAGATTACAGTTTATCTTTTAAGACTTCTTAGGGTAGTACTGTCTGTTCCAGCTAACAGGGGTTATTTTCTTGCACTGAATCTCTTGCCTCCTGTTATTCCAATGCTGTCTGCATCTCTGGATAATTACATAAAGATTGCTGCATCTTCAAATTCTAGTAGTAGCAACTTTGTGAATAAAATGCCAACTGATAATATGGAAACAATTGCTGAAGTGCTTGATTGTTTCTTGCATGCTGTCACTACAATTATGGGTTACACAACCATTGATGAAAGAGAACTTCAAATGCAAGATGGATTATTGGAGTTAATTGTTTCATATCAAGTGATTCATCGCCTTCATGATCTTTTTACGCTTTATGATAGGCCTCAGGTGGACGGATTTCCTTTTCCTTCATCCATTATACTAAGTCTTAATCTCTTAGCAGTATTAACTTCTAGACGGGGTTCTCTCTCAACAATTAATTGGGAAGCTGATATATATAAATCAATAGCTGAAAATTTAAATGAAGGTTCACAAATGATAAACTGCAATGATGCTGTTGATAAATTTGTGATGAAAGATACTTCTGGAGATATCAGTTTTTCTCAATTTCTACAGACAGTCACTCTTCCACAGACAAGTGAGCTTATACCAGCAGATGAGTCTACTCAAATGCATATTATACGGTTACATCCAGCAGGTTTCTGTCAGTCAGATGCATCTGAGACAGTATTGAGAATTGAGACATCTGATCTTTCTGTTAACTTGAACAAAAAAGATGATGCTGCATCAATGGCAGATAGACTCACTGTTGGATCTCAGAAAGTTAAGCCAGGAGAACCAACTAACTCACCATCGGAACAGAAAATTCAAAAGATAACAATGGATAACCAGACATGCAGAAAGATAATTGATGAGCCCACTATGCTTGATAATTCAGAAAGAAAGAAAGGTGTCTCTAAGCAACCTGTAGCTTTTCTTCTCTCAGTCATAGCTGACACTGGTCTTGTTAGTCTTACATCATTGCTGACAGCAGTATTGCTACAGGCAAATGGCCGATTATCATCTGACCAGACTTCCTACGTTCTCCCCTCCAATTTTGAAGAGGTTGCTATTGGAGTATTGAAGATTTTGAACAATGTGGCATGCTTGGATCTCTCGTTATTGCAGAAAATGCTGGCAAGGTCAGATTTGAGAATGGAATTCTTCCACTTAATAAGCTTCTTACTTTCACATTGCATAAGCAGATGGAAATCAGCTAATGATCAGATCAGTTTACTTCTGCTGGAATCCTTGCTGCTGCTGGGATACTTCTCTTTGTTCCACGCTGGAAACCAAGCAGTCCTTTGTTGGGGAAAAACGCCGACAATTCTTCACAAGATCTGCGACCTGCCATTTGTCTTCTTCAGCGATCCTGAGCTTACTCCCATATTAGCCGGGACTCTCATAGCCGCATGCTATGGCTGTGAACAGAACCGTGGCATGATCCAACAAGAGCTCAGCATAGAAATGATACTCTCTCTGCTGAGATCTTGCAGACTTGAAGCCTCACTGCTGTATCCACAAGACACTAACTCACCAAATGTCTCATCCGATGTGATTTCATCAGTGCCAGAGGCTAAAAAGACTCAAAACGACAGCCTCTTGAGGCTGAACCGTAGAGGCGTACTTAGTGTGCCGGGGCGAGGAGGAATCAGTGGCACTCGAGGTTTCAAATATAGTTCTCAAAGGGATAACAGAGCAACAAAAACTCTTGATGATTGGGCTCTCAAACACAATCAGCCTGCCTCCGAGGCTTCCTATGCTTCCATGCTCCACAGGAGATTTCCTCCATGTTTCTTGGATAGAGCTGAGGAGTTCTTCACTGTCGAGACCTCGAATTTTCCGCAGCATGACTGAATGGTCTCATATATTGTTGCTCTTCGGAGAAAGAGGATGAGACGGGGCTGTTTCTTCTGTTCCACCGTTTTGGGGATTCTCTTTGGGTGTCTGCAAGTGTACAGAAGGAGAAATAGAGCTCTGCTTATGTTGGGAAAGCATTTATTATGGAGGTAGTTTATGAAGTTCACATAAATTTTTTGTTGCGATTAAATTGTTAGAGAATTTTAGATTATGTGGTCATATTGTGCTGTTAATTATTAGAAATTTCATGCAGAAACTGCTCTCCTTAAATGCTCAGTGGAAAAATAAATCCTCACTTATGATCGAGTTTTTGGGCATTCACAAGTCCTAAACTTTTGTTTATCAAGTATTTAGTTAATATAGCGTGCTATTGTTGCATTTTAGAGCCTTTAATTTATTTTATGTTATTTTTTATGTGAGGTTTTTCTAGTATAATTGAGAGTGACTATCAACAATTTTGGACTTAAAGCCACGGCATATTGACAAGCCAAGAGCACTTTTATTGATTTG

Network for GWHGAAEX003945

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF16501.4	SCAPER_N	307	408	1.10E-13

Protein Sequence

>GWHPAAEX003945
MDKELGTDDDQSSGWHEVRKKHRTNSKISIQKTSGEPNKRIHLSSRHNQALKNDKILEASTVQGGSLKRSRLKNVDSNVSVAALNVTKNDTELEMLGGLPKIKWGNIEDASFAVSVSGDSGNTKTDENAHFASCGLQKEQTFAADANLDVFVFSSNYAQDDDATSENAEESLIETCGEVCEVSSKYKDITNIELKNSSNNFKEKFRVSIMQNENLNGLASEDVDVESSSPSSNVEVAETNSEKYIDKSNVSEVSAVSNVSVVNNSSPLHNLHVSKNSSAKVSADSLTSNEDVLSDGPDKGEDDHIEGKERFRERLWCFLFENMNRAVDELYLLCELECDREQMNEVILVLEEAISDFRELKCRVENFEGTKRSAAQSSKDMAVASLKTEHRRPHALSWEVRRMTTSPHRAEILSSSLEAFRKIQMERASKHATHDGKDMIFPLSNMQNCSEKSLRGNEKHSNGRKQSSSSEIKRMDAIHEKSIKYKADSAASSLDRSCSVQAGILTSENLLISASGKWKKEPLETILEFENQASKKDKLLPTNRIEKQSNALDMIKRNNSLGIKEKEKDKWNAVPWKSMDAWKEKRNWEDILKSPVRSSSRLSCSPGVGRKSVERAKVLHDKLMSPEKKKKSALDMRKEAEERHARALRIRGQLENERLQRLQRVSEKFNRVNEWQAVRSLKLREGLNARQQRSESRHEAYLAQVVKRAGDESSKVNEVRFITTLNEENKKLILRQKLHDSELRRAEKMQTIKIKQKEDSAREEAALERRKLLEAEKMQRLAEIQRKKEEAQLRREEERKASSAAREAKAVEQLRRKEIRAKAQLEEAELLAQKLAEKLSESEQRRKFYLEQIREKASTDFKDQSSPLLRRSVNREGLGRHITAPYVEDNQTAACVPVVGYSVPGFSYPEQQQSLKRRIKRIRQRLMALKHDFIEPPFFAENLGFGYRTLIGTARAKIGKWLQELQRLRQARKEGAVSIGLIVSDMIKFLEGKDIELYVSRQAGLLDFISSALPASHTSKPESGQITVYLLRLLRVVLSVPANRGYFLALNLLPPVIPMLSASLDNYIKIAASSNSSSSNFVNKMPTDNMETIAEVLDCFLHAVTTIMGYTTIDERELQMQDGLLELIVSYQVIHRLHDLFTLYDRPQVDGFPFPSSIILSLNLLAVLTSRRGSLSTINWEADIYKSIAENLNEGSQMINCNDAVDKFVMKDTSGDISFSQFLQTVTLPQTSELIPADESTQMHIIRLHPAGFCQSDASETVLRIETSDLSVNLNKKDDAASMADRLTVGSQKVKPGEPTNSPSEQKIQKITMDNQTCRKIIDEPTMLDNSERKKGVSKQPVAFLLSVIADTGLVSLTSLLTAVLLQANGRLSSDQTSYVLPSNFEEVAIGVLKILNNVACLDLSLLQKMLARSDLRMEFFHLISFLLSHCISRWKSANDQISLLLLESLLLLGYFSLFHAGNQAVLCWGKTPTILHKICDLPFVFFSDPELTPILAGTLIAACYGCEQNRGMIQQELSIEMILSLLRSCRLEASLLYPQDTNSPNVSSDVISSVPEAKKTQNDSLLRLNRRGVLSVPGRGGISGTRGFKYSSQRDNRATKTLDDWALKHNQPASEASYASMLHRRFPPCFLDRAEEFFTVETSNFPQHD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.700
SRP064423	SRR2545915	Juvenile tuber	20.100
SRP108465	SRR5643513	five period of Gastrodia elata	11.510
	SRR5643514	five period of Gastrodia elata	11.020
	SRR5643515	five period of Gastrodia elata	8.960
	SRR5643524	five period of Gastrodia elata	9.520
	SRR5643525	five period of Gastrodia elata	3.830
	SRR5643528	five period of Gastrodia elata	3.650
	SRR5643658	five period of Gastrodia elata	3.520
	SRR5643659	five period of Gastrodia elata	8.330
	SRR5643660	five period of Gastrodia elata	10.030
	SRR5643661	five period of Gastrodia elata	7.480
	SRR5643662	five period of Gastrodia elata	6.830
	SRR5643663	five period of Gastrodia elata	7.670
	SRR5643664	five period of Gastrodia elata	7.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.410
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.770
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.890
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.610
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.190
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.360
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.600
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	19.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.970
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.200
SRP279888	Gastro	Gastrodia elata tuber	6.37
	Juven	Juvenile tuber	12.85
	Mother_Gastro	Mother tuber of Gastrodia elata	6.78
	Mother_Juven	Mother tuber of Juvenile	10.75