Detail information of GWHGAAEX003951/evm.TU.scaffold_142.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|32471474|ref|NP_864467.1|2.00E-24serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1]
KOGKOG11878.00E-179Serine/threonine protein kinase
nrgi|743837087|ref|XP_010936290.1|0PREDICTED: proline-rich receptor-like protein kinase PERK4 isoform X2 [Elaeis guineensis]
Swissprottr|Q8GX23|PERK5_ARATH0Proline-rich receptor-like protein kinase PERK5
trEMBLtr|M0SKN7|M0SKN7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P03200_001}
TAIRAT2G184708.00E-179roline-rich extensin-like receptor kinase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014021029222112206+
Transcript Sequence

Network for GWHGAAEX003951

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr2554582.80E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.180
SRR2545915Juvenile tuber1.320
SRP108465SRR5643513five period of Gastrodia elata1.890
SRR5643514five period of Gastrodia elata2.750
SRR5643515five period of Gastrodia elata1.860
SRR5643524five period of Gastrodia elata2.600
SRR5643525five period of Gastrodia elata0.890
SRR5643528five period of Gastrodia elata1.180
SRR5643658five period of Gastrodia elata0.910
SRR5643659five period of Gastrodia elata1.490
SRR5643660five period of Gastrodia elata1.750
SRR5643661five period of Gastrodia elata1.780
SRR5643662five period of Gastrodia elata0.920
SRR5643663five period of Gastrodia elata0.800
SRR5643664five period of Gastrodia elata1.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.860
SRR6049655Rhizomagastrodiae_C368-T10_good_11.410
SRR6049656Rhizomagastrodiae_C368-T07_good_11.710
SRR6049657Rhizomagastrodiae_C368-T07_good_11.150
SRR6049658Rhizomagastrodiae_C368-T04_good_11.080
SRR6049659Rhizomagastrodiae_C368-T04_good_11.010
SRR6049660Rhizomagastrodiae_C368-T01_good_11.810
SRR6049661Rhizomagastrodiae_C368-T04_good_11.370
SRR6049662Rhizomagastrodiae_C368-T01_good_12.190
SRR6049663Rhizomagastrodiae_C368-T01_good_12.050
SRR6049664Rhizomagastrodiae_C368-T10_good_11.980
SRR6049665Rhizomagastrodiae_C368-T10_good_11.980
SRP279888GastroGastrodia elata tuber 1.48
JuvenJuvenile tuber2.28
Mother_GastroMother tuber of Gastrodia elata 2.02
Mother_JuvenMother tuber of Juvenile 0.99