Detail information of GWHGAAEX003955/evm.TU.scaffold_142.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|114797974|ref|YP_759248.1|1.00E-07PII uridylyl-transferase [Hyphomonas neptunium ATCC 15444]
nrgi|743837512|ref|XP_010936425.1|0PREDICTED: uncharacterized protein LOC105056061 isoform X1 [Elaeis guineensis]
Swissprottr|Q8LJW3|ACR4_ARATH0ACT domain-containing protein ACR4 {ECO:0000305}
trEMBLtr|W9RAM6|W9RAM6_9ROSA0[Protein-PII] uridylyltransferase {ECO:0000313|EMBL:EXB44892.1}
TAIRAT1G690400ACT domain repeat 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014023015702304338+
Transcript Sequence

Network for GWHGAAEX003955

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01842.24ACT1361772.40E-07
PF01842.24ACT3494091.20E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.190
SRR2545915Juvenile tuber28.340
SRP108465SRR5643513five period of Gastrodia elata42.580
SRR5643514five period of Gastrodia elata40.390
SRR5643515five period of Gastrodia elata41.160
SRR5643524five period of Gastrodia elata45.660
SRR5643525five period of Gastrodia elata70.270
SRR5643528five period of Gastrodia elata55.310
SRR5643658five period of Gastrodia elata102.830
SRR5643659five period of Gastrodia elata25.190
SRR5643660five period of Gastrodia elata24.250
SRR5643661five period of Gastrodia elata25.280
SRR5643662five period of Gastrodia elata30.240
SRR5643663five period of Gastrodia elata30.190
SRR5643664five period of Gastrodia elata27.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.840
SRR6049655Rhizomagastrodiae_C368-T10_good_125.970
SRR6049656Rhizomagastrodiae_C368-T07_good_130.430
SRR6049657Rhizomagastrodiae_C368-T07_good_126.160
SRR6049658Rhizomagastrodiae_C368-T04_good_134.530
SRR6049659Rhizomagastrodiae_C368-T04_good_131.350
SRR6049660Rhizomagastrodiae_C368-T01_good_124.030
SRR6049661Rhizomagastrodiae_C368-T04_good_131.170
SRR6049662Rhizomagastrodiae_C368-T01_good_135.910
SRR6049663Rhizomagastrodiae_C368-T01_good_127.890
SRR6049664Rhizomagastrodiae_C368-T10_good_131.840
SRR6049665Rhizomagastrodiae_C368-T10_good_131.840
SRP279888GastroGastrodia elata tuber 38.77
JuvenJuvenile tuber52.09
Mother_GastroMother tuber of Gastrodia elata 47.04
Mother_JuvenMother tuber of Juvenile 45.18