Detail information of GWHGAAEX003958/CADD00344.3.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014026198932639416+
Transcript Sequence

Network for GWHGAAEX003958

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05099MET, HGFR Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathwaymap04010
PI3K-Akt signaling pathwaymap04151
Focal adhesionmap04510
Adherens junctionmap04520
Axon guidancemap04360
Axon regenerationmap04361

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.980
SRR2545915Juvenile tuber16.260
SRP108465SRR5643513five period of Gastrodia elata17.300
SRR5643514five period of Gastrodia elata25.270
SRR5643515five period of Gastrodia elata17.720
SRR5643524five period of Gastrodia elata22.130
SRR5643525five period of Gastrodia elata14.250
SRR5643528five period of Gastrodia elata10.860
SRR5643658five period of Gastrodia elata8.830
SRR5643659five period of Gastrodia elata23.830
SRR5643660five period of Gastrodia elata20.250
SRR5643661five period of Gastrodia elata22.550
SRR5643662five period of Gastrodia elata21.390
SRR5643663five period of Gastrodia elata24.290
SRR5643664five period of Gastrodia elata23.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.670
SRR6049655Rhizomagastrodiae_C368-T10_good_14.020
SRR6049656Rhizomagastrodiae_C368-T07_good_113.720
SRR6049657Rhizomagastrodiae_C368-T07_good_110.780
SRR6049658Rhizomagastrodiae_C368-T04_good_115.200
SRR6049659Rhizomagastrodiae_C368-T04_good_114.220
SRR6049660Rhizomagastrodiae_C368-T01_good_113.780
SRR6049661Rhizomagastrodiae_C368-T04_good_111.090
SRR6049662Rhizomagastrodiae_C368-T01_good_113.490
SRR6049663Rhizomagastrodiae_C368-T01_good_112.720
SRR6049664Rhizomagastrodiae_C368-T10_good_115.970
SRR6049665Rhizomagastrodiae_C368-T10_good_115.970
SRP279888GastroGastrodia elata tuber 19.11
JuvenJuvenile tuber17.05
Mother_GastroMother tuber of Gastrodia elata 18.35
Mother_JuvenMother tuber of Juvenile 14.94