Detail information of GWHGAAEX003965/evm.TU.scaffold_143.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198500|ref|YP_003269709.1|2.00E-31cation transport protein ChaC [Haliangium ochraceum DSM 14365]
KOGKOG31822.00E-105Predicted cation transporter
nrgi|695043756|ref|XP_009409585.1|3.77E-109PREDICTED: cation transport regulator-like protein 2 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0THW8|M0THW8_MUSAM1.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P15810_001}
TAIRAT5G262202.00E-105ChaC-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000145439257460102+
Transcript Sequence

Network for GWHGAAEX003965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04752.11ChaC31791.60E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22596GGCT Metabolic pathways map01100
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006751Biological Processglutathione catabolic process
GO:0003839Molecular Functiongamma-glutamylcyclotransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms478.860
SRR2545915Juvenile tuber382.290
SRP108465SRR5643513five period of Gastrodia elata129.830
SRR5643514five period of Gastrodia elata128.180
SRR5643515five period of Gastrodia elata121.930
SRR5643524five period of Gastrodia elata117.130
SRR5643525five period of Gastrodia elata131.700
SRR5643528five period of Gastrodia elata98.170
SRR5643658five period of Gastrodia elata101.240
SRR5643659five period of Gastrodia elata271.860
SRR5643660five period of Gastrodia elata337.700
SRR5643661five period of Gastrodia elata286.300
SRR5643662five period of Gastrodia elata334.640
SRR5643663five period of Gastrodia elata322.590
SRR5643664five period of Gastrodia elata392.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1154.300
SRR6049655Rhizomagastrodiae_C368-T10_good_1150.950
SRR6049656Rhizomagastrodiae_C368-T07_good_1131.380
SRR6049657Rhizomagastrodiae_C368-T07_good_1146.730
SRR6049658Rhizomagastrodiae_C368-T04_good_1128.320
SRR6049659Rhizomagastrodiae_C368-T04_good_1127.650
SRR6049660Rhizomagastrodiae_C368-T01_good_1124.620
SRR6049661Rhizomagastrodiae_C368-T04_good_1120.940
SRR6049662Rhizomagastrodiae_C368-T01_good_198.340
SRR6049663Rhizomagastrodiae_C368-T01_good_1108.190
SRR6049664Rhizomagastrodiae_C368-T10_good_1123.950
SRR6049665Rhizomagastrodiae_C368-T10_good_1123.950
SRP279888GastroGastrodia elata tuber 290.67
JuvenJuvenile tuber134.22
Mother_GastroMother tuber of Gastrodia elata 41.67
Mother_JuvenMother tuber of Juvenile 68.98