Gene detail

Detail information of GWHGAAEX003966/evm.TU.scaffold_143.14

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|226311309\|ref\|YP_002771203.1\|	2.00E-32	hypothetical protein BBR47_17220 [Brevibacillus brevis NBRC 100599]
KOG	KOG2614	2.00E-89	Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
nr	gi\|695035340\|ref\|XP_009405099.1\|	9.08E-137	PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|O81360\|ABA2_PRUAR	4.00E-22	Zeaxanthin epoxidase, chloroplastic (Precursor)
trEMBL	tr\|B9SVQ8\|B9SVQ8_RICCO	3.00E-130	Monoxygenase, putative {ECO:0000313\|EMBL:EEF32317.1}
TAIR	AT5G05320	2.00E-89	FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000145	617216	656659	-

Transcript Sequence
>GWHTAAEX003966 TCCCCTCTCATTTTTCTCTATACCAATTCCTCTTCGTTTCTTCTGTGGAAAGCCTGATTCTTCTTCGCCTCTATTGTCGAGCGACGCAAGCATGAGCTGTCTCTCCCTCTCCTTCAATATGATAAGAAAACGTGTCGAGCTCGTCTACTACTCTCCTCAACTTAGCGTCAATCCCCCTTAGCACCGATTGGTGTTCTCTACAAGCATCATCCTCCTTCTCCATGGGCGAGGCCGATCTCTTTCTTCCCCTCACCGACACTCCTCGCATCCCTTTCTTCTGTTACTTGCCGATAGTTGCAAATAAGCAAAAAAATCTCGCCGATCCCACCTTGTTCTTCCTCGATGTAAGGTGGACCGACGACACTCCACTCTTTTGAGAGTCACTGATTGGCCAGATCTGCACACCGATCCATCAGCCAACCCCTCTCGGCTTGGAGCTGAGAGCTCCCATTGCCGAGCCATCCATCTTCATCCAGCCGAGCCTCTTATTCTCCACCGGCGACCGAGCAGCAGCCGAACTTCCACCTCTCGACTGAGCTCCATCTCTTCCTTCCGTTCAGTTAAACGCTGAGCCGAGGGCTCTCCTTGAAGGCCGATCAATAGACGAACAACATCAACCCTCTTCTTCCATCCCCCGAATCCTTCCATCTCTTCCTCCTCACATGCAGCAGCACTGGTGTTCTACGATGAACTCAAAGGGTTCTTTGATATGCAGCAAAGGTAGTACCTAGCAGCCCAAGCAGCAACAGAGGAAACAATAACATGCAGCCTAAGTAGCAACAGAAGAAACATCAATCTGCAGCCCAATCAACACCAGAGGCAGCAACATCAAAGAGCAAATCTGAAAAGGAAAATGGCGGGGGAGGCTGTGGAGGAATGTGTGATTGTGGGTGGGGGTATTGCCGGGCTTGCAACAGCACTAGCATTAAATCGAGTAGGAAAGAAGTCCCTGGTTTTGGAACGCCTGCATGAGTTACCGTCAACCGGAGGCGCACTAACCTTATTTCCCAATGCTTGGCGTGCCCTTCGTGCCCTCGGCGTCGCCCATAAGCTCTTATCGCAGTACCGTTGCCTTCAAGGTGGTTGCGTGATAAATCTTGTGAATGGTAGTGTGCAGGCACAATCATTTGCTGCAGCAAATGAAGCCGGGGAGAGCATTGGAACAAGGCTAGTTCACAGGAAGGTGCTGCTAGAGGCGATGGCCGCTGAACTTCCTCCGGATACTATTCGCTTTTCTTCAAGGGTGGCTTCTATAAAGGCCGAATCAAAGAGTGTTGTGGTACTGAAGCTGGAAGATGGAAGAATCATAAGCACTAAGACTTTGATAGGTTGTGACGGCCTGAACTCAGAAGTGGCGAAGTGGCTGGGCTTAGCTCTGCCCAAGGATTCCGGGCGATCAGCAGTGCGTGCCCTCTCAGTCTTTCCTCGTGGACATGGTTTCAGCCATGTAACACGTCAATTTCTGTCTGCAGACAAAAGGGCTGGCATATTTCCAGTTAATGAAAATGATATCTGCTGGTTCATCACCCACCTCACCACTCCCAAAGTCAAGGAAATCGGGAGAGATCCGGAGAAGATCCAGTGCGAGGTCATGAACAGCTTGGCCGCAGAATTTCCACTGGAATTCAAGCACGTGGTGGAGCGTAGCGAACCGTGGAGCATGACGTGGGACCCTCTCTTTTATAGAACGCCGTGGGAGGTCCTCTTCGGCCGGACCCATAGCGGCTGCGTAACGGTCGCCGGCGACGCCCTCCACCCCATGACGCCGGAACTCGGCCAGGGCGGCTGCATCGCTCTCGAGGACGCCGTCGTCCTCGCTCGCTGCCTCGCACGTGCGGAATCTTCCCGCGACGTCGAGGCTGCTTTTGCGCACTATGTGGCAGAACGCCGTTGGCGGGCTGCCGGACTTATCGTGGCTTCCTACCTTTCCGGCTCAGTTCAGCAGGCGTCGGCCGGGGTCTGGACCGGGCCGCTCAGGCTGCTTCGGAACTTTCTCTTCTACCGCTTCGTGTTCGCATGGATCGTGGGCCTCTCGCGCTTTGACTGCGGCATTTTGCCATCCGACGGCTACGGATGATTTGCTAGTAAAATAAAGAAAAATAAACATGTGAATACCCATATAATAAACATATGAATTTAAGTTGTGGTATAAAATCTTCCAAACATATGAATTTAAGTTATGTAATAAACATGGAATTTAAGTTATGTAACAAATATGAAATTCAAATATGCTAATCTTCTAAATTTTATATTAATCACAAGTTATTGAGAACTGATTGTTTGTAAATCAATGACTTTTTTT

Network for GWHGAAEX003966

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module5

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01494.18	FAD_binding_3	9	353	6.90E-29

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071949	Molecular Function	FAD binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.140
SRP064423	SRR2545915	Juvenile tuber	2.260
SRP108465	SRR5643513	five period of Gastrodia elata	6.360
	SRR5643514	five period of Gastrodia elata	66.590
	SRR5643515	five period of Gastrodia elata	29.540
	SRR5643524	five period of Gastrodia elata	81.350
	SRR5643525	five period of Gastrodia elata	17.880
	SRR5643528	five period of Gastrodia elata	26.520
	SRR5643658	five period of Gastrodia elata	21.350
	SRR5643659	five period of Gastrodia elata	3.840
	SRR5643660	five period of Gastrodia elata	5.210
	SRR5643661	five period of Gastrodia elata	10.040
	SRR5643662	five period of Gastrodia elata	9.040
	SRR5643663	five period of Gastrodia elata	10.180
	SRR5643664	five period of Gastrodia elata	9.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.340
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.310
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.070
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.620
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.050
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	24.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.410
SRP279888	Gastro	Gastrodia elata tuber	8.79
	Juven	Juvenile tuber	8.02
	Mother_Gastro	Mother tuber of Gastrodia elata	19.94
	Mother_Juven	Mother tuber of Juvenile	17.91