Detail information of GWHGAAEX003972/evm.TU.scaffold_143.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743804579|ref|XP_010927227.1|1.00E-99PREDICTED: DNA-binding protein BIN4 isoform X1 [Elaeis guineensis]
Swissprottr|Q9FLU1|BIN4_ARATH2.00E-59DNA-binding protein BIN4
trEMBLtr|K3YTG9|K3YTG9_SETIT6.00E-92Uncharacterized protein {ECO:0000313|EnsemblPlants:Si017564m}
TAIRAT5G246301.00E-41double-stranded DNA binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000145863104882983+
Transcript Sequence

Network for GWHGAAEX003972

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.500
SRR2545915Juvenile tuber52.020
SRP108465SRR5643513five period of Gastrodia elata44.440
SRR5643514five period of Gastrodia elata51.070
SRR5643515five period of Gastrodia elata41.120
SRR5643524five period of Gastrodia elata47.830
SRR5643525five period of Gastrodia elata30.820
SRR5643528five period of Gastrodia elata32.810
SRR5643658five period of Gastrodia elata32.120
SRR5643659five period of Gastrodia elata38.970
SRR5643660five period of Gastrodia elata48.430
SRR5643661five period of Gastrodia elata36.930
SRR5643662five period of Gastrodia elata27.500
SRR5643663five period of Gastrodia elata33.920
SRR5643664five period of Gastrodia elata36.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.430
SRR6049655Rhizomagastrodiae_C368-T10_good_146.940
SRR6049656Rhizomagastrodiae_C368-T07_good_146.510
SRR6049657Rhizomagastrodiae_C368-T07_good_157.790
SRR6049658Rhizomagastrodiae_C368-T04_good_167.220
SRR6049659Rhizomagastrodiae_C368-T04_good_173.190
SRR6049660Rhizomagastrodiae_C368-T01_good_160.920
SRR6049661Rhizomagastrodiae_C368-T04_good_151.500
SRR6049662Rhizomagastrodiae_C368-T01_good_148.390
SRR6049663Rhizomagastrodiae_C368-T01_good_157.780
SRR6049664Rhizomagastrodiae_C368-T10_good_150.650
SRR6049665Rhizomagastrodiae_C368-T10_good_150.650
SRP279888GastroGastrodia elata tuber 39.83
JuvenJuvenile tuber57.94
Mother_GastroMother tuber of Gastrodia elata 30.25
Mother_JuvenMother tuber of Juvenile 36.42