Detail information of GWHGAAEX003981/evm.TU.scaffold_143.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720055981|ref|XP_010273556.1|0PREDICTED: uncharacterized membrane protein At1g16860-like [Nelumbo nucifera]
Swissprottr|Q9FZ45|Y1686_ARATH0Uncharacterized membrane protein At1g16860
trEMBLtr|A5AF64|A5AF64_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN82086.1}
TAIRAT1G168600Ubiquitin-specific protease family C19-related protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014517183871722912-
Transcript Sequence

Network for GWHGAAEX003981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.940
SRR2545915Juvenile tuber28.780
SRP108465SRR5643513five period of Gastrodia elata22.410
SRR5643514five period of Gastrodia elata23.930
SRR5643515five period of Gastrodia elata24.230
SRR5643524five period of Gastrodia elata22.130
SRR5643525five period of Gastrodia elata24.940
SRR5643528five period of Gastrodia elata17.560
SRR5643658five period of Gastrodia elata29.320
SRR5643659five period of Gastrodia elata27.020
SRR5643660five period of Gastrodia elata22.690
SRR5643661five period of Gastrodia elata27.590
SRR5643662five period of Gastrodia elata29.050
SRR5643663five period of Gastrodia elata28.080
SRR5643664five period of Gastrodia elata19.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.350
SRR6049655Rhizomagastrodiae_C368-T10_good_110.730
SRR6049656Rhizomagastrodiae_C368-T07_good_120.920
SRR6049657Rhizomagastrodiae_C368-T07_good_118.800
SRR6049658Rhizomagastrodiae_C368-T04_good_112.830
SRR6049659Rhizomagastrodiae_C368-T04_good_19.030
SRR6049660Rhizomagastrodiae_C368-T01_good_117.150
SRR6049661Rhizomagastrodiae_C368-T04_good_116.240
SRR6049662Rhizomagastrodiae_C368-T01_good_131.170
SRR6049663Rhizomagastrodiae_C368-T01_good_120.510
SRR6049664Rhizomagastrodiae_C368-T10_good_120.870
SRR6049665Rhizomagastrodiae_C368-T10_good_120.870
SRP279888GastroGastrodia elata tuber 23.92
JuvenJuvenile tuber21.55
Mother_GastroMother tuber of Gastrodia elata 20.80
Mother_JuvenMother tuber of Juvenile 20.32