Detail information of GWHGAAEX003990/evm.TU.scaffold_143.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672163454|ref|XP_008801576.1|4.67E-44PREDICTED: LOB domain-containing protein 24-like [Phoenix dactylifera]
Swissprottr|P59468|LBD24_ARATH5.00E-36LOB domain-containing protein 24
trEMBLtr|K3YMP0|K3YMP0_SETIT8.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:Si015521m}
TAIRAT3G266602.00E-35LOB domain-containing protein 24

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014520249562025888-
Transcript Sequence

Network for GWHGAAEX003990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.13LOB81052.00E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.370
SRR2545915Juvenile tuber3.540
SRP108465SRR5643513five period of Gastrodia elata8.870
SRR5643514five period of Gastrodia elata7.340
SRR5643515five period of Gastrodia elata8.050
SRR5643524five period of Gastrodia elata10.450
SRR5643525five period of Gastrodia elata2.930
SRR5643528five period of Gastrodia elata5.460
SRR5643658five period of Gastrodia elata9.510
SRR5643659five period of Gastrodia elata2.100
SRR5643660five period of Gastrodia elata1.700
SRR5643661five period of Gastrodia elata1.620
SRR5643662five period of Gastrodia elata2.410
SRR5643663five period of Gastrodia elata3.590
SRR5643664five period of Gastrodia elata1.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.880
SRR6049655Rhizomagastrodiae_C368-T10_good_15.160
SRR6049656Rhizomagastrodiae_C368-T07_good_13.140
SRR6049657Rhizomagastrodiae_C368-T07_good_14.640
SRR6049658Rhizomagastrodiae_C368-T04_good_111.990
SRR6049659Rhizomagastrodiae_C368-T04_good_125.250
SRR6049660Rhizomagastrodiae_C368-T01_good_18.420
SRR6049661Rhizomagastrodiae_C368-T04_good_110.670
SRR6049662Rhizomagastrodiae_C368-T01_good_14.040
SRR6049663Rhizomagastrodiae_C368-T01_good_13.900
SRR6049664Rhizomagastrodiae_C368-T10_good_13.350
SRR6049665Rhizomagastrodiae_C368-T10_good_13.350
SRP279888GastroGastrodia elata tuber 1.94
JuvenJuvenile tuber3.43
Mother_GastroMother tuber of Gastrodia elata 55.38
Mother_JuvenMother tuber of Juvenile 16.94