Detail information of GWHGAAEX003995/evm.TU.scaffold_143.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|296083797|emb|CBI24014.3|1.38E-73unnamed protein product [Vitis vinifera]
Swissprottr|Q9SV15|WRK11_ARATH1.00E-49Probable WRKY transcription factor 11
trEMBLtr|M0SC35|M0SC35_MUSAM1.00E-72Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P05670_001}
TAIRAT4G315501.00E-48WRKY DNA-binding protein 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014523217532323230-
Transcript Sequence

Network for GWHGAAEX003995

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10533.8Plant_zn_clust1151435.30E-11
PF03106.14WRKY1472039.70E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.290
SRR2545915Juvenile tuber14.860
SRP108465SRR5643513five period of Gastrodia elata7.030
SRR5643514five period of Gastrodia elata25.290
SRR5643515five period of Gastrodia elata14.830
SRR5643524five period of Gastrodia elata24.570
SRR5643525five period of Gastrodia elata6.830
SRR5643528five period of Gastrodia elata12.490
SRR5643658five period of Gastrodia elata12.300
SRR5643659five period of Gastrodia elata16.950
SRR5643660five period of Gastrodia elata20.220
SRR5643661five period of Gastrodia elata15.730
SRR5643662five period of Gastrodia elata13.840
SRR5643663five period of Gastrodia elata12.440
SRR5643664five period of Gastrodia elata7.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.000
SRR6049655Rhizomagastrodiae_C368-T10_good_112.790
SRR6049656Rhizomagastrodiae_C368-T07_good_16.090
SRR6049657Rhizomagastrodiae_C368-T07_good_14.750
SRR6049658Rhizomagastrodiae_C368-T04_good_13.590
SRR6049659Rhizomagastrodiae_C368-T04_good_14.240
SRR6049660Rhizomagastrodiae_C368-T01_good_14.580
SRR6049661Rhizomagastrodiae_C368-T04_good_13.850
SRR6049662Rhizomagastrodiae_C368-T01_good_16.330
SRR6049663Rhizomagastrodiae_C368-T01_good_15.690
SRR6049664Rhizomagastrodiae_C368-T10_good_15.750
SRR6049665Rhizomagastrodiae_C368-T10_good_15.750
SRP279888GastroGastrodia elata tuber 11.20
JuvenJuvenile tuber5.31
Mother_GastroMother tuber of Gastrodia elata 70.44
Mother_JuvenMother tuber of Juvenile 47.45