Detail information of GWHGAAEX004004/evm.TU.scaffold_143.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|645235164|ref|XP_008224145.1|1.69E-31PREDICTED: cell number regulator 10-like [Prunus mume]
Swissprottr|P0CW98|PCR9_ARATH2.00E-28Protein PLANT CADMIUM RESISTANCE 9
trEMBLtr|I1IYI2|I1IYI2_BRADI1.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G12460.1}
TAIRAT1G583208.00E-28PLAC8 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014526626382670083-
Transcript Sequence

Network for GWHGAAEX004004

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04749.16PLAC8521372.90E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.330
SRR2545915Juvenile tuber0.190
SRP108465SRR5643513five period of Gastrodia elata12.970
SRR5643514five period of Gastrodia elata12.390
SRR5643515five period of Gastrodia elata8.110
SRR5643524five period of Gastrodia elata11.070
SRR5643525five period of Gastrodia elata53.530
SRR5643528five period of Gastrodia elata32.200
SRR5643658five period of Gastrodia elata58.190
SRR5643659five period of Gastrodia elata3.270
SRR5643660five period of Gastrodia elata3.330
SRR5643661five period of Gastrodia elata0.710
SRR5643662five period of Gastrodia elata2.020
SRR5643663five period of Gastrodia elata2.430
SRR5643664five period of Gastrodia elata1.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.490
SRR6049655Rhizomagastrodiae_C368-T10_good_112.700
SRR6049656Rhizomagastrodiae_C368-T07_good_17.950
SRR6049657Rhizomagastrodiae_C368-T07_good_15.610
SRR6049658Rhizomagastrodiae_C368-T04_good_15.530
SRR6049659Rhizomagastrodiae_C368-T04_good_16.260
SRR6049660Rhizomagastrodiae_C368-T01_good_14.240
SRR6049661Rhizomagastrodiae_C368-T04_good_14.170
SRR6049662Rhizomagastrodiae_C368-T01_good_16.020
SRR6049663Rhizomagastrodiae_C368-T01_good_14.920
SRR6049664Rhizomagastrodiae_C368-T10_good_118.480
SRR6049665Rhizomagastrodiae_C368-T10_good_118.480
SRP279888GastroGastrodia elata tuber 0.86
JuvenJuvenile tuber1.08
Mother_GastroMother tuber of Gastrodia elata 4.73
Mother_JuvenMother tuber of Juvenile 2.14