Detail information of GWHGAAEX004009/evm.TU.scaffold_144.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743805238|ref|XP_010927389.1|1.31E-171PREDICTED: uncharacterized protein LOC105049447 isoform X1 [Elaeis guineensis]
trEMBLtr|M0TVN5|M0TVN5_MUSAM1.00E-171Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P32830_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000154163734202419-
Transcript Sequence

Network for GWHGAAEX004009

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.520
SRR2545915Juvenile tuber26.180
SRP108465SRR5643513five period of Gastrodia elata21.650
SRR5643514five period of Gastrodia elata21.010
SRR5643515five period of Gastrodia elata19.270
SRR5643524five period of Gastrodia elata19.410
SRR5643525five period of Gastrodia elata14.210
SRR5643528five period of Gastrodia elata14.280
SRR5643658five period of Gastrodia elata18.670
SRR5643659five period of Gastrodia elata31.190
SRR5643660five period of Gastrodia elata32.280
SRR5643661five period of Gastrodia elata31.050
SRR5643662five period of Gastrodia elata33.290
SRR5643663five period of Gastrodia elata32.050
SRR5643664five period of Gastrodia elata36.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.220
SRR6049655Rhizomagastrodiae_C368-T10_good_128.230
SRR6049656Rhizomagastrodiae_C368-T07_good_126.680
SRR6049657Rhizomagastrodiae_C368-T07_good_136.320
SRR6049658Rhizomagastrodiae_C368-T04_good_133.020
SRR6049659Rhizomagastrodiae_C368-T04_good_135.090
SRR6049660Rhizomagastrodiae_C368-T01_good_127.540
SRR6049661Rhizomagastrodiae_C368-T04_good_128.460
SRR6049662Rhizomagastrodiae_C368-T01_good_114.490
SRR6049663Rhizomagastrodiae_C368-T01_good_113.790
SRR6049664Rhizomagastrodiae_C368-T10_good_122.140
SRR6049665Rhizomagastrodiae_C368-T10_good_122.140
SRP279888GastroGastrodia elata tuber 24.63
JuvenJuvenile tuber22.72
Mother_GastroMother tuber of Gastrodia elata 24.65
Mother_JuvenMother tuber of Juvenile 24.80