Gene detail

Detail information of GWHGAAEX004011/evm.TU.scaffold_144.8

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743763755\|ref\|XP_010912076.1\|	6.86E-67	PREDICTED: uncharacterized protein LOC105038087 [Elaeis guineensis]
Swissprot	tr\|Q9FGG3\|WTR45_ARATH	5.00E-50	WAT1-related protein At5g64700
trEMBL	tr\|M0T4W6\|M0T4W6_MUSAM	2.00E-62	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P07170_001}
TAIR	AT5G64700	2.00E-49	nodulin MtN21 /EamA-like transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000154	338777	345389	-

Transcript Sequence
>GWHTAAEX004011 CCAAAGGAAGTAAAGTGAAATACAAACTTGACTAGAAAAATGGCTTAATTAAGGTTTGATATATGCTTTAAAAGTATATTAGGTTTGATCTATATATATTATATGGAAAATGCTTCGTTGCCCCCACCAGTGCCCCAAGGCTTTTATCTAGGCAATTTATTGCCTTAAATGAATTTATAATCATGATTTTAACTAGTGAATTTCAATTAATATCAATTAACACTAGATATAGATACATTAATTGTGCTTGGGACCGGAGGAGGTATCGTAGCAACATTCATATTATATGTATGCTTTGTGGGATTTTAAATGAAGGTTTTGCTTTCCAGGTTGATCGAGTTCTATATTCCTCAGTGGTATATCCTTATAATTATGATTTTATTCCATGCACACTTTGTGAAGATGGTGATCCAGAAAATTACAAGGAATGTTGAATGGCTTCGTTTGCAGCCATTGCAGGCAAGAAGTCATTAATAACAACCTACTTGTTCTCTATCTTCTTATCTGATTTGCATGTTCACGAGTACAACTTTTAATGAAATTACATAGATTGCTATACTTGTGGACATACAAATCAATTAAGAAGTATGAGAACAAGGAGGTTGAGGTTAATGAGTTCTTGTTTGCAATAGCTGCTCACGAAGTCCTTCTAATTGCCTCACACCACTCACATATCATTCCATTTTTGTGATTCCTTGAACTGTTATGACTTGGAGACCAATTAGATTATTAAAGGAGGTGCAAATGGAGTCAGGCACTCAAGTGTGCCCTAGGCGCCCAGATGCCTAGGCCAAACAAGTTGGCATGAGACATGGGTGCCCAAGCGCGCCCAAGTGCTCTTAAAGCAGGCCCAAGCCCGAAGCTTGGGTGCCCAGGCGCCTATGGCGAATTAACCTGAAAGCGACGTGCCCCATGAGTTGTTTAGGGCATTTTCAGGTTTGTTTTATGCCCCATATGTAAGCCTAATTTATTTGGCTGGGTTATGTGAGTGCAATTTTTGTGAGAATTTTGAGTGGAGGCTAAGAACTCTAAAACCCTAGAGTGAGAGATGTGGAGAGATCTGAGATTAGAAGAAGAGCAAACTCAAAAGTAGCGATTCCTTCATTCCTTTAGTGATTGATAAGTTGTATGCAACTTTGTATTCATCTCTTAGATTGTGAATTTTTTGGTAGTGTTGTGGTTCCATCATTTTTTCCATTCTTGAGTTTTTCATGTGAATCTTTGTGTTCGTATGCTTGTAGCTTGTGCTGTGATTTATTTCTTGTTTGTGTTGTTATTTTGTTTATTGCTGCAGTGACTCACCAGTTTCATCTTAACATGGAACATAATTTTATATGTGAAGGCATTAAGCAATAAGAAATTTTCATTTCATTCATGCCCCATATGATATTAAAAGGTCTCTATTTAGACTGTAATCAGTACTTCATCAGCTTGTTTTCTTTTTTGTGTAGATGTTTATGTTAGGTTTTTCTTGAGGAAATGAAAATGTTCAAGTAAATACTTGAGACATCAATAGGTTATTACCATAAAAAATTGCGAAACAATGATCGGAATCTTGTCGCACTAAATGAGGGAAGTTCAAAACTTCTTGAGCATACAATTTGATTCTTAATAGGGCTTATTATTTCTCCAAAGAAAAAGAAGATGATTTATAAATTTATACGGCTTGGAGCGGATTTTGTTAATGCTAACAATACATAACGATAAAAATAGAAGAAAAACAGACAAATAATATTATATAAATGTTTAAATACCCATCACTTGGAGCAGATTTTACTGTGAAGAAAGAGGAAGAAGAGAAAAAATGATACAACTTACAAAATTGTCTAGTGGAAAAAAGAGGAGCTAAAACTAATATAAGATAATAATACGCTAGAGAATTTTCTAAGATAACATTGTCCTTTTAAAGGCTAACTGAACATGCTTTTTTTTATGAAGTGAGCACAAAGGTAAAAATGATCACAAATTTTTGCTGTGCTTTAGCTTCAAATCATTTTAAAACACTATTTTAATTTACTTAATGATAACAATGTAGTTCAAGATGGTGATGATGATCAAATTTTTATAAACTTTTTTTATGTAATTGTGATGAAAATATTACAGGCCCTCAAATGGGGCATTGTAGCAAAGCCCTTTTAGGTATTTGTTAATGAATGAACAATGCAAGAATTTCAGCAGTTGAAAATGAACTTTTGTTCTTATTTTATTGCCTCCTATTCAATGGGAGCACCTTGATGATGGTAAGAGTAGGCCACTTGGTTTGTTTTGAACTTAAAAAAGCTAAAATATTGTTACAAGCTGATTGACCTGCTAATGACTTGGTGGCATGCTTTGAAATTTTGTGCACAACTTGGAAAGATTTTCTTGAGGGCCTCTCAACTGCATATTTGCTTATACAAATGGGTGTTTCTTGTGATAAAACATACAATTATGGCTTTTATTTTTTCAATGCGTTTGTTCAATTGAAATTTTAATGAAAATCCTTCTGATCAATGCCAACTTTTTTCTCCTTCCCACTTTTTATCAGGTGCTAGATAAGTATAGCCTAAAGGTGAGTAAACGGACTATCATGCTTTATCTTATCTGTTAGGATGACTGTTCATATATTTCGTTTAAGCATTATCATCGTCCCTTTTCTCATAATTGTTTCTTTTCTACCACTGTAACCATGTTGTTTAATTTGCTATTCAAAACTAGTATAAAAAGTAGCAAATCTTCTATTCTATCTATGCTTCAGATGTTGGCAATGTTATTGTGTGGACTCAGTATTAACGTGAATTGCTTTTAGTATTCTTGAAATGAATGGTTAACATCATTTTTTTTTTATCTACGAACATTTTCTGGAAAGTTTAATGGGCTGCTGCTGCTTATGCTCCTCTATTTCTATCGCCTGCTTGATGGGGTTTATTCAGAGATCCTTTTACTGGAATGCCTATCTTTCTTTACATATAGACTTCTTGTAGACATTTTTTGTGAAATTTTAATATGATGGGCTCTTGCCCTCAACTTTTTCAATAAAAAAAAATTAAGTGTGCTTATTACATGTTTTTATGATTATAATGAAAAATGTGAATAATTGAGCTATAATGTTTATTATTATAAATTCATTATTAATATGTTAAAAATAAGATAAGTTTAATGATTTTTCAGTAATATTGAAGCATAAAAGTTACTATGGGAAGAGCAATGCCGCCAATAATTTAATAATAAAGTGGGGGATGTAATGGAGCTAAGCTTAATATTTTGATGTAATGGAGTGAAAATCATTTTGCTTTTTTCAATACTGACTAAAGAAAATAATTCTGATACTTATTTAGTCTGAGAAAGATGTAATTAATGTGATGAAAATTTCTACATTGGAGTGTTACAATGAGGCATTACATTTTAGATGAGCCTCAAATATGAATCAAAGACCGGTGTGATTTAAATCCAAGACCTGCGATAACATATCATGAGTCTCAATTGGACTATAACACCATTCACATGAATGCCAATGTGATTGAGAAAAGCTTGATGCTCCCCTCACTTTGCTCGGCACAAAACCATTCCATGATAAATGCACCCCGACATCATCGCATTCCAATGGGACACATCACGGGGTTCCTTCAAATCATCGAAGTCCAACCAGGCTTGATCAAGGCTAGAGCATGTTGAGCACTTGTCAGTCTCATCTTTCTCATTCGAACCTGATTTTGTTGTATAGAAGCCGAACGAGAGGATGAAAATCCATGGACCTTCTTCCCCAGCCGGAGCAGCCCTAGATTTGCAGCAATGCTTAAAAGGAAACAGAAACTCCGTGATCCTCCATGAAAAGCTTCGCAAAGCTAATGATTCTCGCCGCATCAGCATACCATTCGCCTCTTATTATCAGAATCTGAGAGAAGGCATCGGATTCTTTCCCTCTCAATGCCGTCTCTGCGGATCCATACTGATCTTAAGAGGGACATGACATGCTTCTCCTCGTGAACCAGCTTCCTGTGCTCTCCCTCCTCAAGCTCCTTTCTGTCCCGAGCCAGCTTCCCCTGCTGTCCCTCCTGAAGCCTCTTTTCCGTTCAAAGCGCCAAGCCCGCGAACCGGCTAGTTCTAAGGTTGTGCTCGGCGGAATCGGCGGATCAATTTGCACCCCGCTAGATCCGGCAGGGGCTGCGGGCTGGAAAAGGTTTATTGAAATTTATTTAAATTAATAATTTTTTTGTAGAGATTAAATGAGACATTTTTAAATTTTAGAATTCAGAGATAAATTGAGATAAATTTAAATCCAAATATTGGGAATATTCCAAAGAATCTAAATTATTCTTATTTAACAGGATATGTTCAAAATCTGTTAACACTGAAATATTATTAGAAATGATACATTCTTTTATCCATTAAAAATCTGTAATGATAATCATTTTCATTAGTGGAAGCTTACTTTTTACTTTTGTTGGCAATAAAGATACTTTCCCTTAGCCAATAAGACAAAATTTCAAATTTAATATGCGGCCCTCTTCATTGAATTGAGTTGAAGTTGCTTCTTTTTTGCTCAAATCCTGTAGTATTTATGTCAGATTTGTTTTACAAGGAATCACTTTTAATTGAATTATTAAGGCAGGATGGCAGAATGAAAGCCTTATATTGCAATAATCTTCTCTCAATTCATATATTCATTAACGAATATTGTCAACAAAATCGCATTTAATCAAGGCATGAGCACCTTTGTCTTTGTTTTTTACAGACAAGTCATTGCTTCTGTTCTTCTGACTCCATTAGCTATCATCTTTGCAAGGAGATCAGCACCAAAAGCATCAACCAAAATTCTAATCAAAATTTTCATGGTTTCCCTCTTAGGATGTCCAATCAGTTTGAATCTACAGAGCATTGTTATCAATTACACATCTGCAAAATGGAAACTTTTCAACCGAAAAGCTTACCGGGGATCACCAAGCTTGCTGGCATTGTTATCTGTATAGGAGGAGTCCTGTTCATAGCCTTCTATCAGGGCACAAAACTTAAGCCTCTGAATCTACTTCATATTGAGTCTTTTCTTCACAGAAGTAGAAATCACAATTATGTCAATGAAAACAGAAACAGATGGATGTTAGGATCATTTCTTTTGTTCCTATGTGGATTATTTTGGGCTTTATGTACAGTCCTGCAGGGGATGTTACTCAAGGAATATCCTGACAACCTGCTCTTATCAACTCTGATGACTATTTTTAGTACTTTCCAATCTTGTATCATTGCATTCATCTTTGAAAAGAACATGGAAAAATGGAAGATGCATTGGGATGTGGGACTGCTTGCAGTGGTTTATAATGGTGTTTTTGTTGCTGGCCCTGTACTATACCTGACTGGCTACTGCATTAAAAGGAAGGGTGCAGTCTTTACAGCTATGTTCTCCCCTGTGACTGTTGTTTTCACTCTCATTATTGCATCAGTTTTACTTGGGGAAATCACAAGTCTGGGAAGTGTATTGGGATGCCTTTTAATGATTGGAGGTCTTTATTGTGTACTATGGGGAAAGAGCAGAGAGAAAAAGCATGTAGTAGAGCACTAGTTGAAATATTAGAATATGAACAAAAGCTTTGTAATGTTGAAGGAGAAAAAGCATGAGCCAATAGTTTAACAATAAACCCTTGAAGATGTAGTTTTTCATCAATATTACCTTTTCGTGAATTAAAGGGCTTCTCATAAAATTGTCCTTTTTCAAGCTCTGTTCCCTTAAATCGAACACAAATGATGCCATAATCTATGTTGTTCGGCTCAATGA

Network for GWHGAAEX004011

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00892.19	EamA	84	222	4.70E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.070
SRP064423	SRR2545915	Juvenile tuber	4.080
SRP108465	SRR5643513	five period of Gastrodia elata	4.020
	SRR5643514	five period of Gastrodia elata	4.760
	SRR5643515	five period of Gastrodia elata	3.780
	SRR5643524	five period of Gastrodia elata	4.720
	SRR5643525	five period of Gastrodia elata	8.340
	SRR5643528	five period of Gastrodia elata	4.120
	SRR5643658	five period of Gastrodia elata	6.470
	SRR5643659	five period of Gastrodia elata	4.550
	SRR5643660	five period of Gastrodia elata	5.260
	SRR5643661	five period of Gastrodia elata	3.680
	SRR5643662	five period of Gastrodia elata	3.090
	SRR5643663	five period of Gastrodia elata	5.290
	SRR5643664	five period of Gastrodia elata	4.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.730
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.580
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.980
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.520
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.970
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.950
SRP279888	Gastro	Gastrodia elata tuber	8.31
	Juven	Juvenile tuber	7.89
	Mother_Gastro	Mother tuber of Gastrodia elata	2.93
	Mother_Juven	Mother tuber of Juvenile	3.66