Detail information of GWHGAAEX004018/evm.TU.scaffold_144.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743818180|ref|XP_010931146.1|1.26E-36PREDICTED: protein YLS9-like, partial [Elaeis guineensis]
Swissprottr|Q9SJ52|YLS9_ARATH2.00E-14Protein YLS9
trEMBLtr|C5XQL1|C5XQL1_SORBI2.00E-36Putative uncharacterized protein Sb03g040790 {ECO:0000313|EMBL:EES03932.1}
TAIRAT5G063206.00E-22NDR1/HIN1-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000154628663629280-
Transcript Sequence

Network for GWHGAAEX004018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.150
SRR2545915Juvenile tuber25.190
SRP108465SRR5643513five period of Gastrodia elata17.880
SRR5643514five period of Gastrodia elata27.270
SRR5643515five period of Gastrodia elata23.220
SRR5643524five period of Gastrodia elata20.390
SRR5643525five period of Gastrodia elata29.640
SRR5643528five period of Gastrodia elata17.090
SRR5643658five period of Gastrodia elata21.980
SRR5643659five period of Gastrodia elata32.670
SRR5643660five period of Gastrodia elata51.530
SRR5643661five period of Gastrodia elata51.200
SRR5643662five period of Gastrodia elata57.070
SRR5643663five period of Gastrodia elata53.800
SRR5643664five period of Gastrodia elata55.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.690
SRR6049655Rhizomagastrodiae_C368-T10_good_161.050
SRR6049656Rhizomagastrodiae_C368-T07_good_135.320
SRR6049657Rhizomagastrodiae_C368-T07_good_119.480
SRR6049658Rhizomagastrodiae_C368-T04_good_124.920
SRR6049659Rhizomagastrodiae_C368-T04_good_122.610
SRR6049660Rhizomagastrodiae_C368-T01_good_113.450
SRR6049661Rhizomagastrodiae_C368-T04_good_116.160
SRR6049662Rhizomagastrodiae_C368-T01_good_130.110
SRR6049663Rhizomagastrodiae_C368-T01_good_125.200
SRR6049664Rhizomagastrodiae_C368-T10_good_163.960
SRR6049665Rhizomagastrodiae_C368-T10_good_163.960
SRP279888GastroGastrodia elata tuber 61.72
JuvenJuvenile tuber30.17
Mother_GastroMother tuber of Gastrodia elata 42.62
Mother_JuvenMother tuber of Juvenile 31.46