Detail information of GWHGAAEX004021/evm.TU.scaffold_144.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743817847|ref|XP_010931050.1|3.06E-16PREDICTED: protein MKS1-like [Elaeis guineensis]
Swissprottr|Q8LGD5|MKS1_ARATH8.00E-09Protein MKS1
trEMBLtr|M0TEB0|M0TEB0_MUSAM2.00E-16Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P03200_001}
TAIRAT3G183602.00E-09VQ motif-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000154673529674423-
Transcript Sequence

Network for GWHGAAEX004021

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05678.13VQ45702.50E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20725MKS1 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.680
SRR2545915Juvenile tuber0.110
SRP108465SRR5643513five period of Gastrodia elata48.520
SRR5643514five period of Gastrodia elata59.530
SRR5643515five period of Gastrodia elata66.720
SRR5643524five period of Gastrodia elata45.390
SRR5643525five period of Gastrodia elata0.620
SRR5643528five period of Gastrodia elata0.740
SRR5643658five period of Gastrodia elata0.400
SRR5643659five period of Gastrodia elata0.760
SRR5643660five period of Gastrodia elata1.020
SRR5643661five period of Gastrodia elata1.600
SRR5643662five period of Gastrodia elata0.470
SRR5643663five period of Gastrodia elata0.850
SRR5643664five period of Gastrodia elata1.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1120.520
SRR6049655Rhizomagastrodiae_C368-T10_good_1197.160
SRR6049656Rhizomagastrodiae_C368-T07_good_1121.200
SRR6049657Rhizomagastrodiae_C368-T07_good_162.680
SRR6049658Rhizomagastrodiae_C368-T04_good_1115.500
SRR6049659Rhizomagastrodiae_C368-T04_good_1106.000
SRR6049660Rhizomagastrodiae_C368-T01_good_159.040
SRR6049661Rhizomagastrodiae_C368-T04_good_167.410
SRR6049662Rhizomagastrodiae_C368-T01_good_154.230
SRR6049663Rhizomagastrodiae_C368-T01_good_191.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1271.520
SRR6049665Rhizomagastrodiae_C368-T10_good_1271.520
SRP279888GastroGastrodia elata tuber 0.91
JuvenJuvenile tuber2.19
Mother_GastroMother tuber of Gastrodia elata 10.27
Mother_JuvenMother tuber of Juvenile 2.82