Gene detail

Detail information of GWHGAAEX004031/evm.TU.scaffold_144.34

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0724	2.00E-45	Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nr	gi\|567906885\|ref\|XP_006445756.1\|	9.72E-51	hypothetical protein CICLE_v10016071mg [Citrus clementina]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	8.00E-42	Transcription factor DIVARICATA
trEMBL	tr\|V4U9T9\|V4U9T9_9ROSI	4.00E-51	Uncharacterized protein {ECO:0000313\|EMBL:ESR58996.1}
TAIR	AT5G04760	2.00E-45	Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000154	1120113	1120686	-

Transcript Sequence
>GWHTAAEX004031 ATGTACGGCGGTTGGGAGCTAGAGTTCAGCGAAGGAGGAGAGGGGAGATGGACGACGGCAGAGAACAAGGCGTTCGAGAGGGCGCTGGTGGAGGTGCCGGAAGAAGCGCCGGATCGGTGGTGGCGTATCGCCGCTCAGATCCCCGGAAAATTGCCGGAGGAAGTCCGCCTCCACTATCTCCTGCTCCTCCACGACATCCACCTCATCGACTCCGGCGGCGTCGATCTCCCCCCCTACCAGGCCCACCATGACTCCCCGGCCCCGCCCAAGGAGGCCAGGAGAAAGGGGATTCCCTGGAGCGAGGACGAGCACAGGAGGTTTTTGGAAGGATTGGAGAGATTTGGGAGGGGGGATTGGAGGAATATATCCAGGTGGGCGGTGAAGACGAGGACTCCGACGCAGGTCGCCAGCCACGCCCAGAAGTTCTATCTCCGACAGACTCTCAAGAACGAGACCAAGCGCAAGAGCATTCACGACATCATCACTGCTTCTTCTTCTTAG

Network for GWHGAAEX004031

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.30	Myb_DNA-binding	15	62	3.00E-06
PF00249.30	Myb_DNA-binding	98	141	2.20E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.900
SRP064423	SRR2545915	Juvenile tuber	42.300
SRP108465	SRR5643513	five period of Gastrodia elata	230.310
	SRR5643514	five period of Gastrodia elata	224.570
	SRR5643515	five period of Gastrodia elata	338.000
	SRR5643524	five period of Gastrodia elata	250.590
	SRR5643525	five period of Gastrodia elata	421.090
	SRR5643528	five period of Gastrodia elata	358.490
	SRR5643658	five period of Gastrodia elata	287.180
	SRR5643659	five period of Gastrodia elata	205.490
	SRR5643660	five period of Gastrodia elata	218.370
	SRR5643661	five period of Gastrodia elata	261.750
	SRR5643662	five period of Gastrodia elata	519.590
	SRR5643663	five period of Gastrodia elata	354.460
	SRR5643664	five period of Gastrodia elata	453.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	105.940
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	60.490
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	103.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	145.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	132.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	140.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	154.600
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	128.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	61.640
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	118.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	64.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	64.950
SRP279888	Gastro	Gastrodia elata tuber	745.90
	Juven	Juvenile tuber	248.29
	Mother_Gastro	Mother tuber of Gastrodia elata	925.12
	Mother_Juven	Mother tuber of Juvenile	264.54