Detail information of GWHGAAEX004063/evm.TU.scaffold_144.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302381889|ref|YP_003817712.1|8.00E-06NAD-dependent epimerase/dehydratase [Brevundimonas subvibrioides ATCC 15264]
KOGKOG02906.00E-11Conserved WD40 repeat-containing protein AN11
nrgi|358345490|ref|XP_003636810.1|6.08E-13Progesterone 5-beta-reductase [Medicago truncatula]
Swissprottr|Q6PQJ9|5BPOR_DIGLA1.00E-113-oxo-Delta(4,5)-steroid 5-beta-reductase
trEMBLtr|G7ZXL0|G7ZXL0_MEDTR2.00E-13Progesterone 5-beta-reductase {ECO:0000313|EMBL:AES83948.1}
trEMBLtr|G7ZXL0|G7ZXL0_MEDTR2.00E-08Progesterone 5-beta-reductase {ECO:0000313|EMBL:AES83948.1}
TAIRAT3G266406.00E-11Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015421622912172267+
Transcript Sequence

Network for GWHGAAEX004063

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata3.660
SRR5643514five period of Gastrodia elata2.150
SRR5643515five period of Gastrodia elata2.350
SRR5643524five period of Gastrodia elata1.140
SRR5643525five period of Gastrodia elata3.170
SRR5643528five period of Gastrodia elata2.300
SRR5643658five period of Gastrodia elata2.170
SRR5643659five period of Gastrodia elata1.810
SRR5643660five period of Gastrodia elata2.260
SRR5643661five period of Gastrodia elata1.770
SRR5643662five period of Gastrodia elata4.610
SRR5643663five period of Gastrodia elata2.100
SRR5643664five period of Gastrodia elata4.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.640
SRR6049655Rhizomagastrodiae_C368-T10_good_17.290
SRR6049656Rhizomagastrodiae_C368-T07_good_14.080
SRR6049657Rhizomagastrodiae_C368-T07_good_12.510
SRR6049658Rhizomagastrodiae_C368-T04_good_110.630
SRR6049659Rhizomagastrodiae_C368-T04_good_16.570
SRR6049660Rhizomagastrodiae_C368-T01_good_13.220
SRR6049661Rhizomagastrodiae_C368-T04_good_17.890
SRR6049662Rhizomagastrodiae_C368-T01_good_19.380
SRR6049663Rhizomagastrodiae_C368-T01_good_111.460
SRR6049664Rhizomagastrodiae_C368-T10_good_14.830
SRR6049665Rhizomagastrodiae_C368-T10_good_14.830
SRP279888GastroGastrodia elata tuber 3.49
JuvenJuvenile tuber1.05
Mother_GastroMother tuber of Gastrodia elata 6.14
Mother_JuvenMother tuber of Juvenile 1.69