Detail information of GWHGAAEX004067/evm.TU.scaffold_144.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26628.00E-140Magnesium transporters: CorA family
nrgi|743763694|ref|XP_010912043.1|0PREDICTED: magnesium transporter MRS2-F-like [Elaeis guineensis]
Swissprottr|Q8L4S2|MRS2F_ORYSJ3.00E-172Magnesium transporter MRS2-F
trEMBLtr|M0RVK7|M0RVK7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P26270_001}
TAIRAT3G196408.00E-140magnesium transporter 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015422804392302060+
Transcript Sequence

Network for GWHGAAEX004067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01544.17CorA3134201.10E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0030001Biological Processmetal ion transport
GO:0046873Molecular Functionmetal ion transmembrane transporter activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.620
SRR2545915Juvenile tuber15.120
SRP108465SRR5643513five period of Gastrodia elata15.370
SRR5643514five period of Gastrodia elata30.500
SRR5643515five period of Gastrodia elata24.080
SRR5643524five period of Gastrodia elata28.340
SRR5643525five period of Gastrodia elata29.540
SRR5643528five period of Gastrodia elata30.430
SRR5643658five period of Gastrodia elata24.420
SRR5643659five period of Gastrodia elata18.450
SRR5643660five period of Gastrodia elata21.300
SRR5643661five period of Gastrodia elata18.560
SRR5643662five period of Gastrodia elata21.900
SRR5643663five period of Gastrodia elata21.690
SRR5643664five period of Gastrodia elata18.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.420
SRR6049655Rhizomagastrodiae_C368-T10_good_126.960
SRR6049656Rhizomagastrodiae_C368-T07_good_121.090
SRR6049657Rhizomagastrodiae_C368-T07_good_114.310
SRR6049658Rhizomagastrodiae_C368-T04_good_117.630
SRR6049659Rhizomagastrodiae_C368-T04_good_116.300
SRR6049660Rhizomagastrodiae_C368-T01_good_113.020
SRR6049661Rhizomagastrodiae_C368-T04_good_114.030
SRR6049662Rhizomagastrodiae_C368-T01_good_122.040
SRR6049663Rhizomagastrodiae_C368-T01_good_119.280
SRR6049664Rhizomagastrodiae_C368-T10_good_135.820
SRR6049665Rhizomagastrodiae_C368-T10_good_135.820
SRP279888GastroGastrodia elata tuber 25.10
JuvenJuvenile tuber12.15
Mother_GastroMother tuber of Gastrodia elata 16.68
Mother_JuvenMother tuber of Juvenile 16.70