Detail information of GWHGAAEX004070/evm.TU.scaffold_144.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198500|ref|YP_003269709.1|5.00E-30cation transport protein ChaC [Haliangium ochraceum DSM 14365]
KOGKOG31821.00E-98Predicted cation transporter
nrgi|749502292|ref|NP_001291354.1|1.17E-103cation transport regulator-like protein 2 [Elaeis guineensis]
trEMBLtr|M0SC12|M0SC12_MUSAM6.00E-105Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P05440_001}
TAIRAT5G262201.00E-98ChaC-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015425495862550236-
Transcript Sequence

Network for GWHGAAEX004070

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04752.11ChaC31791.70E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22596GGCT Metabolic pathways map01100
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006751Biological Processglutathione catabolic process
GO:0003839Molecular Functiongamma-glutamylcyclotransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.940
SRR2545915Juvenile tuber11.540
SRP108465SRR5643513five period of Gastrodia elata3.270
SRR5643514five period of Gastrodia elata8.260
SRR5643515five period of Gastrodia elata14.750
SRR5643524five period of Gastrodia elata8.160
SRR5643525five period of Gastrodia elata5.420
SRR5643528five period of Gastrodia elata30.850
SRR5643658five period of Gastrodia elata8.130
SRR5643659five period of Gastrodia elata9.530
SRR5643660five period of Gastrodia elata14.980
SRR5643661five period of Gastrodia elata8.250
SRR5643662five period of Gastrodia elata36.590
SRR5643663five period of Gastrodia elata17.450
SRR5643664five period of Gastrodia elata22.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.320
SRR6049655Rhizomagastrodiae_C368-T10_good_12.690
SRR6049656Rhizomagastrodiae_C368-T07_good_14.310
SRR6049657Rhizomagastrodiae_C368-T07_good_11.300
SRR6049658Rhizomagastrodiae_C368-T04_good_15.800
SRR6049659Rhizomagastrodiae_C368-T04_good_11.930
SRR6049660Rhizomagastrodiae_C368-T01_good_110.050
SRR6049661Rhizomagastrodiae_C368-T04_good_13.690
SRR6049662Rhizomagastrodiae_C368-T01_good_115.540
SRR6049663Rhizomagastrodiae_C368-T01_good_121.210
SRR6049664Rhizomagastrodiae_C368-T10_good_19.400
SRR6049665Rhizomagastrodiae_C368-T10_good_19.400
SRP279888GastroGastrodia elata tuber 18.24
JuvenJuvenile tuber5.93
Mother_GastroMother tuber of Gastrodia elata 85.61
Mother_JuvenMother tuber of Juvenile 55.35