Gene detail

Detail information of GWHGAAEX004075/evm.TU.scaffold_145.1

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1910	Uncharacterized conserved protein
nr	gi\|743759537\|ref\|XP_010932714.1\|	PREDICTED: uncharacterized protein LOC105053302 isoform X2 [Elaeis guineensis]
trEMBL	tr\|F6H148\|F6H148_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45670.1}
TAIR	AT1G58250	Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000144	645	49965	+

Transcript Sequence
>GWHTAAEX004075 ATGGGTCTTGTAGATGGACTACCTCACCCAATCAGATCTGAGATTGACATTAAGCTTGGAGGAACTCAGTGCAATCTTATTTTAAACAGACTGAAGCCTTGGTTTAATCTTGATTTTTCAAAAAAGAAAGAAATTGCTGTTAATAATGAACTGCAAAAATGTCATGCTAATAAAACTGCTGCTATCATGTGGACATTTACTGTATCTGCACCAGAGATGACTGTTGTTCTGTACAATCTGAATGATGTACCACTCTATTATGGTTGTTCACAATCATCTCACCTGTTTGTTAACAATATTGCAAGCAAGGGAGTTCAAGCACATGCAGAGCTTGGTGAAGTGCATATCTATATGGCAGATGAATATCAGAAATGTCTAAAGTTAGATTTATTTGAGGTGGAAGGTAAGTTTGGATCTTTAATGCATATGGCAAGGGTTAGTTTAGATTGGGGACTTCGTGAGATGGAAGCACATGACGAACAAGATTCTAACAGTTTGAAATTAATTTTTTCTATTGATATATCTGGCATGGGTTTGTCTTTCTATTTACGTCATATTGAATCTCTAATACTGACCTTGACATCCTTCAAGTCATTTTTCAAAACCTTGCATATCGCACGTAAACGAGATCTGCATGATAAGGCTGGACATACAAAAAAAGCAACTGCAAAAGGGACTAGGATTTTAAAACTAAAGCTTGAAAAATGTATTATAAAGTATTGTGGTGAAGTTAGTATGAATGACATGGACATTGCAGACCCCAAGCGCGTAAATTTTGGTTCACAAGGTGGTGTTGTTGTCATCAATGTTTCTGCAGATGGTACAGAACGAAGGGCAAACATCATCTCAAATACATCTAGTGGCTGCAATAAATTGAAATTTTTCACGTCTTTAAGCATTTCACATCTAGATGTTTGCTTAAATAAAGAAGAAAGACGCTCATTGCAGGTAGATCTTGAGAGAGCTAGGTGTATCTATCAGGAAAATTCATGTGATCATTTAGCTGGATCCAAAGTCACTATATTTGATGTACAACAAGCAAAATTTGTTCGTCGCTCCGGGGGCCTTAGTGATGTTGCTGTTTGCTCACTTCTCAATGTGACTGATATTTTAATTAGGTGGGAACCTGATGTCCATTTAGCAGTATTTGAAGTTATAACTTCTGTGAAGTACTTTCTATATAAAATGAAGGATCCTAGTTCTGATGATGGAACCAAGGAAAAACTTCAAAGTCTAAAAGATAAGCAAATGGAAAAAGACATTGCCATGGCACAGGCAAAATCCTATAGGAATCACAGTAGAAGGGAGGAAGTCTATGCCATTGATGTGGAGAAACTTAAGTTTACTGCTGAGGTTGCTGATGGTGTTGAAACTGTTGTTCACGTGCAGTCCATTTTCTCAGAAAATGCAAAGATTGGCATGTTGCTTGAAGAGTTCGTTCTAAGTTTAAATAATGCCAAAGTTCTTAGAAGCAGCAGAATGCAAATTTCTCGCATTCCGGTATCTTCTTCATGCAATTCAACAGATACTAAAGTACAGTTGATGTCTTCATGGGATACCAGCTCATGGGATTGGGTGATTCAAGGTCCTGATCTTCATATTTGCATGCCGTACAGGCTGCAGCTCCGTGCTATTGAGGATGCAGTGGAGGATATGCTTCGCGGCTTAAAACTAATTGTTGATGCTAAGACTAATTGCATGTTACAAATGAAAAAAGACGGTTCCAGGAAGTCTAAGTCTAAATCTACAAATTTTGGTACTGTTAGATTCATTATTCGCAAGCTAACTGCAGATATCGAGGAGGAACCTATGCAAGGATGGCTGGATGAACACTATCAGTTGATGAGGACTGAGATTTGTGAAGCACTAGTTAGAGCTAAGTTTCTTGATGACATTCTTGAAAAGGGAAGAAATTCTGGAGGTTCTGAGCCCAAGGAATTATGTTCTGAAAGGAAGTTTATCCATCATGGAGTTGAGATTGACACATCTAATGATCTAGCTGTTCAAAATTTGAATGAAGAGATTCAGAAGCAGGCATTTCGAATGTATTATAGAGCATGCAAGAAATTAGTACCTTCAGAAGGGTCAGGAGCATGCTCAAAGGGATTTCAAGCTGGTTTTAATGCTAGCAAGAACAGATGTTCACTGTTATCTCTTTGCGCTACAGAATTGGATGTAACTTTGACCAAAATTGTTGGTGGGGATGATGCAATGGTTGACTTTGTGAAACAGATGGATCCAGCCAGCTTAGACAATGACATACCTTTTTCTCGGACATATGGAAGGAATGTTGATATTATTTCAGGATCATTAGTTTTCAAATTAAGAAATTACACATTTCCTCTGTTTTCTGCAACTGATGGAAAATGCAAAGGTCGCATTGTGCTTGCTCAGCAGGCAACAAGTTTACAACCTCAAATAGAACAAGATGTGTACATTGGAAAGTGGTGGAAGGTGCGGATGCTTCGTTCGGCCAGTGGAACTACCCCTCCAATGAAAATGTACTCAGACCTGCCGATATACTTTAACAAAGCAGAACTTTCTTTTGGGGTGGGGTATGAACCAAGCTTTGCTGATATCAGCTATGCATTTACTGTAGCTCTTCGGAGAGCTAATCTTGGTGGAAGGAATTGGGCGTCGTCCACTGCCACTGATCAAAATGTTTCTGCAAGTAATTTACCCAAAAAGGAACGGAGTTTACCTTGGTGGGATGATATGAGGTACTATATTCATGGGAAAATTTGCTTATTTTTCATGGAGAACAGGTGGAATCTTCTGGCAACGACAAATCCTTATGAGAAACTGGATGAACTTAAAATTGTGTCAGCTTACATGGAAATTCAACAAACAGATGGCCGCCTATTTTTTTTGTCAAAGGATTTCAAGATTTATTTAAGTAGTCTTGAGAGTCTAGTAAAAAATAGCAGTTTGAAGCTTCCCAGTGCTTCTGTTCCTTTTCTTCATTCTCCAGGATTTTCTCTTGATGTTACTATGGATTGGGACTGTGAATCAGGTTGCCCACTTAACCATTACTTGCATGCACTTCCAAAGGAAAGGGAGCCTCGAAAGAAAGTTTTTGATCCATTTCGTTCAACTTCTCTCTCACTCAGGTGGAATTTTTCTCTCAGACCCTCATTACAGTGTTATGATAAATTCACTCCATCTTCTGCTGCTACCAATGATCTATTACTAGATGAATCCATGCATGATTCTTTGCAAACAATGAAAAACACTGCAACTAATTCTCCAACAATGAACATAGGTGCTCATGACTTGGCTTGGTTATTCAAATGGTGGAGCCTTAACTATAGTCCTCCTCATAAACTACGTTCCTTTTCTCGGTGGCCACATTTTGGTATTGTGAAAACAGCTAGATCTGGTAACTTGTCTCTGGACAAGGTTATGACAGAATTTTGTCTCCGTCTTGATGCTACACCATCATGCATCAGATATAGGCCTCTAAGTGAGGATGATCCCGCTAGTGGTCTTACCTTTGAAATGTCTAGGCTTAAGTATGAACTTTGTTATAGCCGTGGCAAGCAGTTGTACACATTTGATTGTAAACGTGAGCTTCTTGATCTTGTCTATCAGGGCCTTGACCTGCATCTTCTCAAGGCATTTCTATGTATTAGTAATAAACAAGATATTCAATCTTCAAAGGGAGCTTCATTGACGCCTTCAACTGATAGTTTAGGTAATGAAAATTTCACTTATCCAGGTGATTCCAGTGGAAAAAATGGTGACGATGGTTTTCTTTTGTTCTCTGATTATTTCACTATACGAAGGCAGGCCCCAAAGGCTGATCCTGCTAGGCTTTTAGCTTGGCAAGAAGCTGGTAGGAGAAACCTTGAGATGACCTATGTGAGGTCTGAGTTTGAAAATGGGAGTGAGAGTGACCATACACGTTCTGACCCTAGTGATGATGATGGATTCAATGTTGTAATTGCTGACAATTGCCGACGGGTATTTGTGTACGGACTTAAGCTGTTGTGGACTATTGAAAATAGAGATGCTGTTTGGTCTTGGGTTGGGGGAATCTCTAAAGCATTTGAACCACCAAAACCATCCCCTTCAAGGCAGTATGCACAGAGGAAATTGTTGGAAGATCAACAAAGAAATGACGGGCATGAAATTTTGAGAGAAGACAATCTTAGGCCATCGGCAATGCATGGTTTAAATTCACCTTCCTCTCAGCATGTTGAGGCTTTAGGTTCAGCGTCTTCTGTTTCTATCTCTGCTAAAATGGACAGTACAACATGCAATGAAGTTGTGAATCATGGGCGTATTGGTGACTTTGAAGAGGACGGAACCCGACACTTTATGGTGAATGTTATTCAACCTCAATTCAACCTTCACTCAGAGGAAGCTAATGGTAGGTTTCTTCTTGCTGCAGCCAGTGGCCGTGTCTTGGCTCGTTCTTTTCATTCTATTCTTCATGTTGGGTATGAGATGATTGAACAAGCCTTGGGCACAACCAGTGCCTCATTTCCTGATATGGAACCTGAGATGACTTGGAAGCGTGCTGAGCTTTCTGTGATGCTGGAGCACGTTCAAGCTCATGTTGCACCAACTGATGTGGATCCTGGAGCTGGTCTGCAATGGCTGCCAAAAATTCTTAGGAGCTCACCCAAAGTAAAAAGAACCGGTGCTTTATTAGAGAGAGTTTTTATGCCTTGTCAAATGTATTTTCGTTACACAAGGCACAAAGGTGGAACTGCAGAGTTGAAGGTTAAGCCATTAAAGGAGCTCATTTTCAATTCGCCCAATATTACGGCAACAATGACATCTCGTCAGTTTCAGGTTATGTTGGATGTACTTAGCAGCCTGCTATTTGCCAGGCTCCCCAAACCACGTAAAAGCAGCCTTTCATACCCAGCTGATGATGATGATGATGTTGAAGAAGAGGCTGATGAGGTGGTTCCTGATGGTGTGGAGGAAGTAGAGCTTGCAAGAATCCAACTTGAACAAAAAGAGAGGGAAAGGAAGATATTTCTTGATGATATTAGGACTCTGGTTTCAAGTGATGTTGGAGATGATTTGAATCTATTCACAGATAGCAATAGCGATCTATGGATGGTATCTTGTGGAAAATTAAGATTGGTACGTGGACTGAGGAAAGAGCTTTGTAATGCTCAAAAATCTAGAAAAGGGGCATCTTCAGCATTGAGAATGGCACTACAAAAAGCAGCACAGTTGCGACTGATGGAAAAGGAAAAGAACAAAAGCCCATCTTGTGCCATGAGAATTTCCATGAGAATCAACAAGGTGGTATGGAGTATGCTTGCAGATGGCAAATCTTTTGCAGAAGCTGAGATAAATGACATGATCTATGATTTTGACCGTGATTACAAAGATATTGGCGTTGCTCAGTTCACCACCAAGTCTTTCGTTGTTAGAAATTGCTTACAAAATGCCAAGTCAGATATGCTATTGTCAGCCTGGAATGCACCTCCTGAATGGGGAAAAAATGTTATGCTTCGTGTAAATGCCAGGCAGGGAGCTCCTAAGGATGGAAGTTCTCCACTTGAACTTTTTCAGGTAGAGATCTATCCATTGAAGATCCATTTAACAGAAACAATGTACCGGATGATGTGGGGTTACTTCTTCCCCGAGGAAGACCAAGACTCCCAAAGGCGACAGGAAGTATGGAAGGTTTCAACGACTGCTGGCTCCAGACGTGTAAAAAAGAGCGCAACCACTGCCCCCCATCACGAGGCGAGTGCGTCAAGAGAGAACGAACCTGCTGCTTCTGCTGCGGGAAGGTCTCTCACAATGGGGCCAGGAGGATCTGCCGACTCTTCGCAAGGGTCCAAATTCCAAAGCCTGAAAGCGAACATCGTGTGCGGAGCAAACCCCGAGCTCCGGCGAGCAGCGCCGCTCGACGAGGCGGAAGATACACGGATCGAGTTATCCGCATCTGGTGAACTGCTCGCCGGCGGTTCCTCAAAGAGCGGCCTCCTAAATCCTGCGATCGAATCTCAGCAGGCTGCTGCTGAGGACTGCTCGAGCAGGGGCGGCAGATCTAAAGACCCAAAGCCTCTCAAGTCCGGCCGACTGTCGAACGAAGAGAAGAAGGTCGGGAAAGCCCATGACGAGAAGAGGGCCAGGTCCCGTCGAATGATGGAGTTCCATAATATCAAAATTAGCCAGGTGGAGCTGCTTGTGACCTATGAAGGTTCGAGATTTGCAGTGAATGATTTGAGGCTGCTGATGGACACATTCCACCGCGACGAGTTCACTGGAACGTGGAGAAGGCTGTTTTCTCGAGTAAAGAAGCACATCATATGGGGCGTTTTGAAATCCGTTACCGGCATGCAGGGCAAAAAGTTCAAGGACAAGGGTGGAAGCCAGAGGGAGGGCATGCCGGAGAGCGATCTCAATTTCAGCGACAGCGATGGAGGCCAGTCCGGAAAGCTCGACCAGTTCCCAGTGTCATGGCTGAAACGGCCGAGTGATGGCGCCGGCGACGGGTTCGTCACCTCCATAAAGGGCCTCTTCAACTCACAGCGCCGCAAGGCCAAGGCGTTTGTCCTGCGGACAATGAGGGGGGAAACCGAGAGCGAGTTCAACAGCGGCGGCGGTGGAGACGACAGGAGCGAGAGCGACACGGAGTATCCATTCGCCCGCCAGTTGACCATCACCAAAGCTAAGAAGCTGATCCGGCGGCACACGAGGAAGTTCCGCTCCAGGGCTCAGAAGAATTCAGGCACAGCCCTTCAAATTCGAGAATCGTATCCGTCGACGCCTAAGGACTTGACTCCGCTGCAGAGCGACTCGTCCGGCGGATCATCCTACGAGGACTTTCATGACTGAGTTTGGAGCATCAAGATGTGAATGGAAGCTATTATAGAAAGAAGCGTTTTTGGTATTTTGCTGTTGGTAGCAGCTGAATGCAATTAAATTTATTACTTTTTGAGATGTATGTGCAACTGTTTAATTGTAACAATATTAGTGCCTCAATTTGTTTGTACTAGTTTTATACAATTTATGTTATACAAACTAAAAAAAAAAAAAGTTTTGCTGCAAAAATGTTACAATTTTGATTATGAAACATAATTATTTCTCTG

Network for GWHGAAEX004075

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10351.8	Apt1	1555	2102	7.50E-111

Protein Sequence

>GWHPAAEX004075
MGLVDGLPHPIRSEIDIKLGGTQCNLILNRLKPWFNLDFSKKKEIAVNNELQKCHANKTAAIMWTFTVSAPEMTVVLYNLNDVPLYYGCSQSSHLFVNNIASKGVQAHAELGEVHIYMADEYQKCLKLDLFEVEGKFGSLMHMARVSLDWGLREMEAHDEQDSNSLKLIFSIDISGMGLSFYLRHIESLILTLTSFKSFFKTLHIARKRDLHDKAGHTKKATAKGTRILKLKLEKCIIKYCGEVSMNDMDIADPKRVNFGSQGGVVVINVSADGTERRANIISNTSSGCNKLKFFTSLSISHLDVCLNKEERRSLQVDLERARCIYQENSCDHLAGSKVTIFDVQQAKFVRRSGGLSDVAVCSLLNVTDILIRWEPDVHLAVFEVITSVKYFLYKMKDPSSDDGTKEKLQSLKDKQMEKDIAMAQAKSYRNHSRREEVYAIDVEKLKFTAEVADGVETVVHVQSIFSENAKIGMLLEEFVLSLNNAKVLRSSRMQISRIPVSSSCNSTDTKVQLMSSWDTSSWDWVIQGPDLHICMPYRLQLRAIEDAVEDMLRGLKLIVDAKTNCMLQMKKDGSRKSKSKSTNFGTVRFIIRKLTADIEEEPMQGWLDEHYQLMRTEICEALVRAKFLDDILEKGRNSGGSEPKELCSERKFIHHGVEIDTSNDLAVQNLNEEIQKQAFRMYYRACKKLVPSEGSGACSKGFQAGFNASKNRCSLLSLCATELDVTLTKIVGGDDAMVDFVKQMDPASLDNDIPFSRTYGRNVDIISGSLVFKLRNYTFPLFSATDGKCKGRIVLAQQATSLQPQIEQDVYIGKWWKVRMLRSASGTTPPMKMYSDLPIYFNKAELSFGVGYEPSFADISYAFTVALRRANLGGRNWASSTATDQNVSASNLPKKERSLPWWDDMRYYIHGKICLFFMENRWNLLATTNPYEKLDELKIVSAYMEIQQTDGRLFFLSKDFKIYLSSLESLVKNSSLKLPSASVPFLHSPGFSLDVTMDWDCESGCPLNHYLHALPKEREPRKKVFDPFRSTSLSLRWNFSLRPSLQCYDKFTPSSAATNDLLLDESMHDSLQTMKNTATNSPTMNIGAHDLAWLFKWWSLNYSPPHKLRSFSRWPHFGIVKTARSGNLSLDKVMTEFCLRLDATPSCIRYRPLSEDDPASGLTFEMSRLKYELCYSRGKQLYTFDCKRELLDLVYQGLDLHLLKAFLCISNKQDIQSSKGASLTPSTDSLGNENFTYPGDSSGKNGDDGFLLFSDYFTIRRQAPKADPARLLAWQEAGRRNLEMTYVRSEFENGSESDHTRSDPSDDDGFNVVIADNCRRVFVYGLKLLWTIENRDAVWSWVGGISKAFEPPKPSPSRQYAQRKLLEDQQRNDGHEILREDNLRPSAMHGLNSPSSQHVEALGSASSVSISAKMDSTTCNEVVNHGRIGDFEEDGTRHFMVNVIQPQFNLHSEEANGRFLLAAASGRVLARSFHSILHVGYEMIEQALGTTSASFPDMEPEMTWKRAELSVMLEHVQAHVAPTDVDPGAGLQWLPKILRSSPKVKRTGALLERVFMPCQMYFRYTRHKGGTAELKVKPLKELIFNSPNITATMTSRQFQVMLDVLSSLLFARLPKPRKSSLSYPADDDDDVEEEADEVVPDGVEEVELARIQLEQKERERKIFLDDIRTLVSSDVGDDLNLFTDSNSDLWMVSCGKLRLVRGLRKELCNAQKSRKGASSALRMALQKAAQLRLMEKEKNKSPSCAMRISMRINKVVWSMLADGKSFAEAEINDMIYDFDRDYKDIGVAQFTTKSFVVRNCLQNAKSDMLLSAWNAPPEWGKNVMLRVNARQGAPKDGSSPLELFQVEIYPLKIHLTETMYRMMWGYFFPEEDQDSQRRQEVWKVSTTAGSRRVKKSATTAPHHEASASRENEPAASAAGRSLTMGPGGSADSSQGSKFQSLKANIVCGANPELRRAAPLDEAEDTRIELSASGELLAGGSSKSGLLNPAIESQQAAAEDCSSRGGRSKDPKPLKSGRLSNEEKKVGKAHDEKRARSRRMMEFHNIKISQVELLVTYEGSRFAVNDLRLLMDTFHRDEFTGTWRRLFSRVKKHIIWGVLKSVTGMQGKKFKDKGGSQREGMPESDLNFSDSDGGQSGKLDQFPVSWLKRPSDGAGDGFVTSIKGLFNSQRRKAKAFVLRTMRGETESEFNSGGGGDDRSESDTEYPFARQLTITKAKKLIRRHTRKFRSRAQKNSGTALQIRESYPSTPKDLTPLQSDSSGGSSYEDFHD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	69.210
SRP064423	SRR2545915	Juvenile tuber	36.640
SRP108465	SRR5643513	five period of Gastrodia elata	21.410
	SRR5643514	five period of Gastrodia elata	24.070
	SRR5643515	five period of Gastrodia elata	25.390
	SRR5643524	five period of Gastrodia elata	24.450
	SRR5643525	five period of Gastrodia elata	24.170
	SRR5643528	five period of Gastrodia elata	19.740
	SRR5643658	five period of Gastrodia elata	22.340
	SRR5643659	five period of Gastrodia elata	21.250
	SRR5643660	five period of Gastrodia elata	24.840
	SRR5643661	five period of Gastrodia elata	20.920
	SRR5643662	five period of Gastrodia elata	22.120
	SRR5643663	five period of Gastrodia elata	23.660
	SRR5643664	five period of Gastrodia elata	26.050
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	16.740
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	22.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.230
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	27.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.510
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.130
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.130
SRP279888	Gastro	Gastrodia elata tuber	29.01
	Juven	Juvenile tuber	34.02
	Mother_Gastro	Mother tuber of Gastrodia elata	30.46
	Mother_Juven	Mother tuber of Juvenile	48.49