Detail information of GWHGAAEX004087/evm.TU.scaffold_145.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|399139292|gb|AFP23421.1|7.99E-173linalool synthase [Freesia hybrid cultivar]
Swissprottr|B3TPQ7|ATESY_MAGGA5.00E-171Alpha-terpineol synthase, chloroplastic (Precursor)
trEMBLtr|I7FQJ9|I7FQJ9_9ASPA3.00E-173Linalool synthase {ECO:0000313|EMBL:AFP23421.1}
TAIRAT3G258309.00E-134terpene synthase-like sequence-1,8-cineole

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014410691291080056-
Transcript Sequence

Network for GWHGAAEX004087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01397.20Terpene_synth31625.80E-34
PF03936.15Terpene_synth_C1934583.00E-85
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0000287Molecular Functionmagnesium ion binding
GO:0010333Molecular Functionterpene synthase activity
GO:0016829Molecular Functionlyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.910
SRR2545915Juvenile tuber1.680
SRP108465SRR5643513five period of Gastrodia elata37.570
SRR5643514five period of Gastrodia elata24.930
SRR5643515five period of Gastrodia elata18.390
SRR5643524five period of Gastrodia elata19.420
SRR5643525five period of Gastrodia elata6.670
SRR5643528five period of Gastrodia elata2.920
SRR5643658five period of Gastrodia elata8.570
SRR5643659five period of Gastrodia elata0.100
SRR5643660five period of Gastrodia elata0.040
SRR5643661five period of Gastrodia elata0.040
SRR5643662five period of Gastrodia elata0.760
SRR5643663five period of Gastrodia elata0.490
SRR5643664five period of Gastrodia elata0.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.740
SRR6049655Rhizomagastrodiae_C368-T10_good_136.690
SRR6049656Rhizomagastrodiae_C368-T07_good_162.450
SRR6049657Rhizomagastrodiae_C368-T07_good_123.250
SRR6049658Rhizomagastrodiae_C368-T04_good_112.890
SRR6049659Rhizomagastrodiae_C368-T04_good_111.830
SRR6049660Rhizomagastrodiae_C368-T01_good_121.580
SRR6049661Rhizomagastrodiae_C368-T04_good_115.510
SRR6049662Rhizomagastrodiae_C368-T01_good_125.080
SRR6049663Rhizomagastrodiae_C368-T01_good_124.280
SRR6049664Rhizomagastrodiae_C368-T10_good_172.460
SRR6049665Rhizomagastrodiae_C368-T10_good_172.460
SRP279888GastroGastrodia elata tuber 9.61
JuvenJuvenile tuber100.97
Mother_GastroMother tuber of Gastrodia elata 1.68
Mother_JuvenMother tuber of Juvenile 2.30