Detail information of GWHGAAEX004095/evm.TU.scaffold_145.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|399139292|gb|AFP23421.1|5.45E-59linalool synthase [Freesia hybrid cultivar]
Swissprottr|B3TPQ7|ATESY_MAGGA1.00E-58Alpha-terpineol synthase, chloroplastic (Precursor)
trEMBLtr|I7FQJ9|I7FQJ9_9ASPA2.00E-59Linalool synthase {ECO:0000313|EMBL:AFP23421.1}
TAIRAT3G258231.00E-47Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014420743842076885+
Transcript Sequence

Network for GWHGAAEX004095

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03936.15Terpene_synth_C21454.00E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0010333Molecular Functionterpene synthase activity
GO:0016829Molecular Functionlyase activity
GO:0000287Molecular Functionmagnesium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.150
SRR2545915Juvenile tuber0.860
SRP108465SRR5643513five period of Gastrodia elata0.170
SRR5643514five period of Gastrodia elata0.510
SRR5643515five period of Gastrodia elata0.160
SRR5643524five period of Gastrodia elata2.200
SRR5643525five period of Gastrodia elata8.390
SRR5643528five period of Gastrodia elata2.220
SRR5643658five period of Gastrodia elata13.390
SRR5643659five period of Gastrodia elata0.270
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.910
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.680
SRR6049655Rhizomagastrodiae_C368-T10_good_16.300
SRR6049656Rhizomagastrodiae_C368-T07_good_119.580
SRR6049657Rhizomagastrodiae_C368-T07_good_111.860
SRR6049658Rhizomagastrodiae_C368-T04_good_18.600
SRR6049659Rhizomagastrodiae_C368-T04_good_110.660
SRR6049660Rhizomagastrodiae_C368-T01_good_121.300
SRR6049661Rhizomagastrodiae_C368-T04_good_18.770
SRR6049662Rhizomagastrodiae_C368-T01_good_122.650
SRR6049663Rhizomagastrodiae_C368-T01_good_122.160
SRR6049664Rhizomagastrodiae_C368-T10_good_19.520
SRR6049665Rhizomagastrodiae_C368-T10_good_19.520
SRP279888GastroGastrodia elata tuber 8.72
JuvenJuvenile tuber77.67
Mother_GastroMother tuber of Gastrodia elata 1.22
Mother_JuvenMother tuber of Juvenile 2.11