Gene detail

Detail information of GWHGAAEX004100/evm.TU.scaffold_145.51

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695046766\|ref\|XP_009411231.1\|	1.05E-177	PREDICTED: terpene synthase 10-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|B3TPQ7\|ATESY_MAGGA	3.00E-164	Alpha-terpineol synthase, chloroplastic (Precursor)
trEMBL	tr\|M0TKQ7\|M0TKQ7_MUSAM	1.00E-177	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P25710_001}
TAIR	AT3G25830	9.00E-139	terpene synthase-like sequence-1,8-cineole

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000144	2612888	2615831	-

Transcript Sequence
>GWHTAAEX004100 ATACTTTGGAGTTTCTTTACCAACAAAAGAAAATGGCCATGAATCTTAGCATTGGTCTTCTTCCGCTTTGCAAAAAGCCACCATTTTTTGTCACTCCCCCTCTTCCTTCTTCGCGGACTTTTCATTCTTTTCAACCTGTAAAAGCAAACTATCATTCAACTTCTTCACCTTCTCGCCGCACGGCAAATTTTCATCCGACAATTTGGGCTGATAGCTACCTGCAATCACTAGCTATTGAATTTGAGGATGAAGAACATATAAGGAAGAGGGATTTGTTAAAGGATGAAGCGAGGCATCTGATTTTTCAGAGAAAAGGCCTGATAGAGCAGCTTGAGCTGGTCGACACCCTGAAGCAACTTGGCGTGTCATATCATTTTGAGATTGAGATAAATGATGTGTTATCATCCTTAAGATTATCACTAGGAAGCATTGATATATTGGAAACTTTTGACCTTTATGATACAGCCTTGCTCTTTAGGATTCAGAGGGAGTATGGCCTAGAGACCTTAAAACCAAGTGTCAATGATTTAGTTAAGAGTTTCAAAAGTGTGAAAAGATGTTGCATGACAAATCTGGAGCCTGAAATCAAGCAAATGTTGAGCCTATATGAGGCTTGTTTCCATGCTAGAGAGGGAGAGGATGAATTGGATGAAGTCTTAGAATTTGCAACTAATTATTTAAGTAATATAAAAGGATCCATATCACCATTAAATCATCAATTGGTTGACATAATTAATCATGCCTTGGACATACCTTTACATTGGAGGATACCAAGGCTACAAACTAGATGGTATATTGATTCATATGAGAGGCAAGGGAACATGATTTCAAGTTTACATGAACTAGCTAAATTGGACTTCAACATAATACAAGGTGTCTATAAAAGGGAGTTAAAGGAACAATCACGGTGGTGGAGAAATCTTGGGATTATTTGTGAAGAATTAAGTTTCTCTAGAGATAGGTTGGTAGAGAGCTACCTCTGGGCTGTGGGTACCATCTATGAACCAAAGTACTCAGAATGTAGAAAAGTGATTTCAAAACATATTTGCTTAATAACTACAATAGACGATATTTATGACGTTTACGGGACCTTGAAGGAACTTGAAGTCTTTACAAAAGCAATAAACGAATGGGATATAAGCACACACCAATCATTTCCAGAATATATGAAGATATTCTTAGTGTTGTTTTTTAACACAGTGCATGATATTGCTAATACAATCTCGATATCAAAAAATTTAGATGTCCTTCCACATCTAAAACGAGCGTGTGCAGATTTGTGCAGTGCATACCTAAAAGAGGCAAGGTGGTATCACGAAAGTTACACACCTAGCTTGGATGACTACATGGATAATGCATGGATTTCAATATCAGGTCACTTGATACTTACTTGTGCCTATTGCTTAAGTGATGACTTAACAGAAGAATCTCTTAAGAATTTAGAGTTCTATCCAAATATTGTTCGTCAATCATGCATTATTTTTCGACTATATGATGATCTTGGAACATCTATGGCTGAGATTGAAAGAGGTGATATTTCAAAATCCATCCAATGCCATATGATGGAGGCCAATGTCTTAGAGCCTATTTCTCGAGGTTATATCAAATGCTTAGTTACAAAATATTGGAAAGCAATGAATAAAGAATACACTACAAATTCTAATTTTGAATCCTTTAAGAAAGTGGCACAAGGACTTCCAAGAATGGCACTATGTGCTTATCAACATGGAGATGGATTTGGATTACCTATTATTGAAACTCGTGAACAAATAAAATCATTATTAATCGAGCCAATATCATGAAAATCACATTTTAATATTTTTTTAAAGCAATTAAATAAAATTGTTTTTCAATATAATTGTGTTTATATTTTTGTTATGTGGGAATTTTGAAGTTTTATAAAGAAGATGATAAACAAAAGTTATTCTTAAATACGGTAGTCATCAAAGTTTTATTTCTATTTTTATGTGAAAAATGCTTTCTTTATAGTGGCTTACATTAATAATGACGGCTATATATAGTCTAACTATATTATGCTAAAATTGTCGCATATGAATCTTCCTTTAGTGTTGAAGCTCTATTTGTTGTCATGTACTTAATAATTGTAGTAGCAGCCCAAGTTAGTAAATTTACTAGCTCTTATTTGTGTCTATTATTATTACAAAGGGCATTATAAATACATCAATTTAAATCAATGCAAATCTTATTACAATGATCATATAATGTTATTCCTAAATTTTTACAAATTTAATTTTTCATAATGATGGCTTCTTATGCTTGGGCTATATTGCATATGCTGGTGTTTAGGCTGCTACTATTTCTATTTGTTA

Network for GWHGAAEX004100

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01397.20	Terpene_synth	58	238	2.40E-28
PF03936.15	Terpene_synth_C	270	533	1.20E-87

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016829	Molecular Function	lyase activity
GO:0000287	Molecular Function	magnesium ion binding
GO:0010333	Molecular Function	terpene synthase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.640
SRP064423	SRR2545915	Juvenile tuber	1.020
SRP108465	SRR5643513	five period of Gastrodia elata	8.970
	SRR5643514	five period of Gastrodia elata	38.990
	SRR5643515	five period of Gastrodia elata	16.020
	SRR5643524	five period of Gastrodia elata	31.590
	SRR5643525	five period of Gastrodia elata	6.950
	SRR5643528	five period of Gastrodia elata	3.850
	SRR5643658	five period of Gastrodia elata	5.900
	SRR5643659	five period of Gastrodia elata	0.930
	SRR5643660	five period of Gastrodia elata	1.010
	SRR5643661	five period of Gastrodia elata	0.750
	SRR5643662	five period of Gastrodia elata	0.530
	SRR5643663	five period of Gastrodia elata	0.540
	SRR5643664	five period of Gastrodia elata	0.330
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.600
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.260
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.940
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.480
SRP279888	Gastro	Gastrodia elata tuber	0.31
	Juven	Juvenile tuber	2.73
	Mother_Gastro	Mother tuber of Gastrodia elata	26.74
	Mother_Juven	Mother tuber of Juvenile	18.93