Detail information of GWHGAAEX004105/evm.TU.scaffold_146.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|284028057|ref|YP_003377988.1|1.00E-24serine/threonine protein kinase with PASTA sensor(s) [Kribbella flavida DSM 17836]
KOGKOG01984.00E-88MEKK and related serine/threonine protein kinases
nrgi|695072837|ref|XP_009383559.1|1.49E-111PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9CAD5|YODA_ARATH2.00E-43Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|M0RRM1|M0RRM1_MUSAM3.00E-99Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12410_001}
TAIRAT5G550904.00E-88mitogen-activated protein kinase kinase kinase 15

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000151105940107124-
Transcript Sequence

Network for GWHGAAEX004105

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase132571.90E-51
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilySTE_STE11

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.180
SRR2545915Juvenile tuber1.950
SRP108465SRR5643513five period of Gastrodia elata13.890
SRR5643514five period of Gastrodia elata6.800
SRR5643515five period of Gastrodia elata10.580
SRR5643524five period of Gastrodia elata5.900
SRR5643525five period of Gastrodia elata10.820
SRR5643528five period of Gastrodia elata8.820
SRR5643658five period of Gastrodia elata25.570
SRR5643659five period of Gastrodia elata2.440
SRR5643660five period of Gastrodia elata0.780
SRR5643661five period of Gastrodia elata1.520
SRR5643662five period of Gastrodia elata2.660
SRR5643663five period of Gastrodia elata2.380
SRR5643664five period of Gastrodia elata1.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.600
SRR6049655Rhizomagastrodiae_C368-T10_good_110.700
SRR6049656Rhizomagastrodiae_C368-T07_good_113.670
SRR6049657Rhizomagastrodiae_C368-T07_good_19.490
SRR6049658Rhizomagastrodiae_C368-T04_good_112.740
SRR6049659Rhizomagastrodiae_C368-T04_good_114.440
SRR6049660Rhizomagastrodiae_C368-T01_good_17.760
SRR6049661Rhizomagastrodiae_C368-T04_good_111.140
SRR6049662Rhizomagastrodiae_C368-T01_good_17.600
SRR6049663Rhizomagastrodiae_C368-T01_good_19.940
SRR6049664Rhizomagastrodiae_C368-T10_good_122.080
SRR6049665Rhizomagastrodiae_C368-T10_good_122.080
SRP279888GastroGastrodia elata tuber 1.68
JuvenJuvenile tuber2.62
Mother_GastroMother tuber of Gastrodia elata 20.82
Mother_JuvenMother tuber of Juvenile 12.87