Detail information of GWHGAAEX004106/evm.TU.scaffold_146.6
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226229238|ref|YP_002763344.1| | 4.00E-22 | putative protein kinase [Gemmatimonas aurantiaca T-27] |
| KOG | KOG1187 | 2.00E-147 | Serine/threonine protein kinase |
| nr | gi|672122114|ref|XP_008784377.1| | 2.13E-169 | PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 [Phoenix dactylifera] |
| Swissprot | tr|Q9SYM9|Y1853_ARATH | 7.00E-148 | Receptor-like serine/threonine-protein kinase At1g78530 |
| trEMBL | tr|E0CRZ0|E0CRZ0_VITVI | 9.00E-164 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI20089.3} |
| TAIR | AT1G78530 | 2.00E-147 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000151 | 113549 | 138532 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004106
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 74 | 276 | 2.30E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-XIIIa |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.700 |
| SRR2545915 | Juvenile tuber | 16.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.980 |
| SRR5643514 | five period of Gastrodia elata | 8.910 | |
| SRR5643515 | five period of Gastrodia elata | 8.830 | |
| SRR5643524 | five period of Gastrodia elata | 8.230 | |
| SRR5643525 | five period of Gastrodia elata | 17.090 | |
| SRR5643528 | five period of Gastrodia elata | 13.930 | |
| SRR5643658 | five period of Gastrodia elata | 18.410 | |
| SRR5643659 | five period of Gastrodia elata | 16.430 | |
| SRR5643660 | five period of Gastrodia elata | 12.000 | |
| SRR5643661 | five period of Gastrodia elata | 13.630 | |
| SRR5643662 | five period of Gastrodia elata | 9.630 | |
| SRR5643663 | five period of Gastrodia elata | 16.310 | |
| SRR5643664 | five period of Gastrodia elata | 12.460 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.240 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.430 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.580 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.650 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.730 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 13.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.320 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.320 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.99 |
| Juven | Juvenile tuber | 4.32 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.55 | |
| Mother_Juven | Mother tuber of Juvenile | 2.93 |