Gene detail

Detail information of GWHGAAEX004116/evm.TU.scaffold_146.18

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2213	Apoptosis inhibitor 5/fibroblast growth factor 2-interacting factor 2, and related proteins
nr	gi\|672107582\|ref\|XP_008778354.1\|	PREDICTED: apoptosis inhibitor 5-like [Phoenix dactylifera]
trEMBL	tr\|M0T4I5\|M0T4I5_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P05870_001}
TAIR	AT1G29030	Apoptosis inhibitory protein 5 (API5)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000151	337604	383964	+

Transcript Sequence
>GWHTAAEX004116 TGATTGCGTCGCGTTCACATCCTGAACTCCTTCCTCACAAAACATTCGTTTGGCAAACAGCCACGCCGGACAAAACAACCGGAACCCACACAGCGCAAAAGGATCACTTCCTCGATCTTCCTCATCCATCCCACTAGAGATTTCTCCAGTTCTGCAAACAAATCTTGTATCGATTTCTGTTTTCTGCCCTTTACTTTTGTTCTGCTGTACTCCTTTGTCATCATCCTCTATTGCATTCTGGAAATGGGCGCCGCCGTCGGCGACGCCAGGGAGGTGGAGAAGCTCTACGAGTACGGGGAGAGGCTCAGTGAGGCCAAGGAAAAGGCGCAGAATGTCAGCGACTACGAGGGGATTTTAAATGCTGTGAAGTGTGGTAGCACCAAGGCCAAGCAGCTGGCGGCTCAGTTAATCCCGAGGTTCTTTAGGTTTTTCCCGGACTTGGACAAGCAAGCTATCAGCGCGCAGTTTGATTTAGTTGAAGAAGAGGAACTTGCGGTGAGAGTACAGGCAATCAGAGGCCTTCCACTTCTTTGTAAAGATAATCCAGATCATGTTTCAAAGATTGTTGATGTCCTGGGGCAGCTTCTCGCTTGTGAGGAGAATGTGGAGCGTGATGCAGTCCATAAAGCTCTTATGTCTCTTTTAAGGCAGGATATTAATGCATCCTTGACTGCTTTGTTTAAGCATGTTGAGATAGGCATGGAAAACATCCGTGAAAAAGTTATTGCATTCCTAAAGGACAAGGTGTTTCCCCTAAAAGCTGAACTGCTTAAACCTCAAGTAGAGATGGAAAGACGTGTCACTGATCTGGTGAAAAAAAGTTTGCAGGATGTAACAGGTGCAGAATTTAAAATGTTTGTGGACTTTCTTAAAAGTTTTAGTATATTTGGAGAGAAAGCTCCTCCAGAGCGTATCCAAGAACTTATTGAAATTATTGAAGGGCAGGCTGATCTTGATGCACAGTTTAATGTATCAGACGTTGACCACATTGATAGGATGATTTCTTGCATGTTCATGGCTTTACCAATTTTTGTGAGAGGTGCTTCAAGCAGTAGATTCCTTAATTATTTTAACAAGCACATAATACCTGTTTTTGACAAGTTACCTGAGGAGAGAAAGCTTGATTTTCTTAAAAGCCTTGCTGGAAGTTCACCTTATGCTACAGCACAGGATTCACGCCAACTGCTTCCTTCAATTGTTCAACTGTTAAAGAATTATATGCCTCGCAGAAAAATGGAAGAGACTACTTTCAACTATGCTGAGTGTTTACTGTACACTTTTCATCAGTTAGCTCATAAGACTCCAAACTCAACGAACAGTCTTTGTGGTTACAAAATTGTAACCGGGCAACCCTCAGATAGACTTGGAGAGGATTTCTCAGATATATATAAAGATTTCACAGAGAGATTGAGCTCTACTGAGGAAATTGTGAGAGCCGCTATAAAGAAAGTAACCCAGGGTATGGCAGAGCATAACAAGGCACTTTCTGCTGCTCAGACTGAAGATGAAAAGGCTAAGATCAAAGCTGAGCAGCAGAAATCCACCTCTGGACTTAGAGTTTGCAACAATATACTGATTATGACTCAGCCATTGCATACAAAATCTCCTTCATTTATTGGTGATAATAAGATAAGCCCATCATGGAAGGAACATGGGAAAGTGATGCCAACAACGGCTGGGGCCAAGAGGAGCGGGGGTCCTTCCAATGGCGGGGGTGCCCTTCCTGTGAGCAAAATGGCCAAGCGGGGTGGGGGAGGCACGCCGAACCAGCTAGTCAACAGAGCGTTGGAGGGCTTGTCTTACGGCGGGAGGAGTGGTGGGAGAGGGAGGGGGGCATTCTTTGGGGGCCGTGGCGGACGGGGCAACAAAGCTTACCGCTAGTGGTTTTCCCAGCCTTGCTCTCTTTTTCTTGCTGCTGCAGAGGTCGGAATAGAAAAAGATGTATTATAAAGCAGGAGTTTGGGCAAAAAGCTAATGCCAAAAGCTGCATTGCTGGTTTTGTTGTTGATTGATTGATATGCGCCCTTCCAGAAACTGTGCCTTTGCACTCTGACTGCATTATCTCTCTCTCTCTCTCTCTCTC

Network for GWHGAAEX004116

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05918.10	API5	11	540	7.60E-201

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	36.650
SRP064423	SRR2545915	Juvenile tuber	33.760
SRP108465	SRR5643513	five period of Gastrodia elata	48.540
	SRR5643514	five period of Gastrodia elata	51.960
	SRR5643515	five period of Gastrodia elata	48.460
	SRR5643524	five period of Gastrodia elata	50.650
	SRR5643525	five period of Gastrodia elata	40.730
	SRR5643528	five period of Gastrodia elata	44.210
	SRR5643658	five period of Gastrodia elata	44.250
	SRR5643659	five period of Gastrodia elata	43.240
	SRR5643660	five period of Gastrodia elata	43.700
	SRR5643661	five period of Gastrodia elata	48.780
	SRR5643662	five period of Gastrodia elata	42.530
	SRR5643663	five period of Gastrodia elata	41.470
	SRR5643664	five period of Gastrodia elata	42.810
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	37.660
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	40.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	39.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	37.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	37.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.060
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.390
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.780
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	45.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	41.280
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	52.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	52.250
SRP279888	Gastro	Gastrodia elata tuber	52.97
	Juven	Juvenile tuber	49.96
	Mother_Gastro	Mother tuber of Gastrodia elata	43.58
	Mother_Juven	Mother tuber of Juvenile	54.20