Detail information of GWHGAAEX004129/evm.TU.scaffold_146.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15613142|ref|NP_241445.1|2.00E-29cytochrome P450 hydroxylase [Bacillus halodurans C-125]
KOGKOG01566.00E-61Cytochrome P450 CYP2 subfamily
nrgi|311033356|sp|P24465.2|C71A1_PERAE1.73E-69RecName: Full=Cytochrome P450 71A1; AltName: Full=ARP-2; AltName: Full=CYPLXXIA1 [Persea americana]
Swissprottr|P24465|C71A1_PERAE8.00E-72Cytochrome P450 71A1
trEMBLtr|D7SHG6|D7SHG6_VITVI5.00E-69Putative uncharacterized protein {ECO:0000313|EMBL:CBI14925.3}
TAIRAT3G262106.00E-61cytochrome P450, family 71, subfamily B, polypeptide 23

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000151603846607778+
Transcript Sequence

Network for GWHGAAEX004129

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.21p45052401.10E-64
Protein Sequence

Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP71B23

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0020037Molecular Functionheme binding
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506Molecular Functioniron ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.050
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata1.380
SRR5643514five period of Gastrodia elata0.850
SRR5643515five period of Gastrodia elata0.440
SRR5643524five period of Gastrodia elata0.900
SRR5643525five period of Gastrodia elata0.180
SRR5643528five period of Gastrodia elata0.480
SRR5643658five period of Gastrodia elata0.320
SRR5643659five period of Gastrodia elata0.310
SRR5643660five period of Gastrodia elata0.340
SRR5643661five period of Gastrodia elata0.430
SRR5643662five period of Gastrodia elata0.420
SRR5643663five period of Gastrodia elata0.360
SRR5643664five period of Gastrodia elata0.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.810
SRR6049655Rhizomagastrodiae_C368-T10_good_112.800
SRR6049656Rhizomagastrodiae_C368-T07_good_14.730
SRR6049657Rhizomagastrodiae_C368-T07_good_111.390
SRR6049658Rhizomagastrodiae_C368-T04_good_18.390
SRR6049659Rhizomagastrodiae_C368-T04_good_18.220
SRR6049660Rhizomagastrodiae_C368-T01_good_18.440
SRR6049661Rhizomagastrodiae_C368-T04_good_114.910
SRR6049662Rhizomagastrodiae_C368-T01_good_15.650
SRR6049663Rhizomagastrodiae_C368-T01_good_11.250
SRR6049664Rhizomagastrodiae_C368-T10_good_12.480
SRR6049665Rhizomagastrodiae_C368-T10_good_12.480
SRP279888GastroGastrodia elata tuber 0.57
JuvenJuvenile tuber23.30
Mother_GastroMother tuber of Gastrodia elata 0.19
Mother_JuvenMother tuber of Juvenile 5.51