Detail information of GWHGAAEX004138/evm.TU.scaffold_146.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|432329672|ref|YP_007247815.1|3.00E-44nicotinamidase-like amidase [Methanoregula formicica SMSP]
nrgi|743771167|ref|XP_010915869.1|3.07E-89PREDICTED: uncharacterized protein LOC105040847 isoform X2 [Elaeis guineensis]
Swissprottr|Q93Z51|NIC4_ARATH3.00E-74Probable inactive nicotinamidase At3g16190 {ECO:0000305}
trEMBLtr|I1KGM1|I1KGM1_SOYBN7.00E-84Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02130.2}
TAIRAT3G161905.00E-65Isochorismatase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000151807547811497-
Transcript Sequence

Network for GWHGAAEX004138

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00857.19Isochorismatase121747.60E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.710
SRR2545915Juvenile tuber7.450
SRP108465SRR5643513five period of Gastrodia elata3.800
SRR5643514five period of Gastrodia elata4.210
SRR5643515five period of Gastrodia elata3.840
SRR5643524five period of Gastrodia elata3.780
SRR5643525five period of Gastrodia elata5.550
SRR5643528five period of Gastrodia elata5.120
SRR5643658five period of Gastrodia elata6.980
SRR5643659five period of Gastrodia elata7.400
SRR5643660five period of Gastrodia elata8.290
SRR5643661five period of Gastrodia elata6.200
SRR5643662five period of Gastrodia elata5.920
SRR5643663five period of Gastrodia elata7.550
SRR5643664five period of Gastrodia elata7.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.120
SRR6049655Rhizomagastrodiae_C368-T10_good_14.620
SRR6049656Rhizomagastrodiae_C368-T07_good_15.100
SRR6049657Rhizomagastrodiae_C368-T07_good_14.080
SRR6049658Rhizomagastrodiae_C368-T04_good_16.200
SRR6049659Rhizomagastrodiae_C368-T04_good_14.980
SRR6049660Rhizomagastrodiae_C368-T01_good_14.940
SRR6049661Rhizomagastrodiae_C368-T04_good_14.930
SRR6049662Rhizomagastrodiae_C368-T01_good_15.670
SRR6049663Rhizomagastrodiae_C368-T01_good_15.670
SRR6049664Rhizomagastrodiae_C368-T10_good_14.450
SRR6049665Rhizomagastrodiae_C368-T10_good_14.450
SRP279888GastroGastrodia elata tuber 8.85
JuvenJuvenile tuber3.89
Mother_GastroMother tuber of Gastrodia elata 2.78
Mother_JuvenMother tuber of Juvenile 2.02