Detail information of GWHGAAEX004140/evm.TU.scaffold_146.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28792.00E-149Predicted E3 ubiquitin ligase
nrgi|743800362|ref|XP_010925901.1|0PREDICTED: peroxisome biogenesis protein 2 isoform X4 [Elaeis guineensis]
Swissprottr|Q9CA86|PEX2_ARATH8.00E-165Peroxisome biogenesis protein 2
trEMBLtr|K3YTY6|K3YTY6_SETIT3.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:Si017732m}
TAIRAT1G798102.00E-149Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000151827733860992-
Transcript Sequence

Network for GWHGAAEX004140

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04757.13Pex2_Pex12772812.30E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
K06664PEX2, PXMP3 Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.660
SRR2545915Juvenile tuber11.380
SRP108465SRR5643513five period of Gastrodia elata11.320
SRR5643514five period of Gastrodia elata13.680
SRR5643515five period of Gastrodia elata13.400
SRR5643524five period of Gastrodia elata11.690
SRR5643525five period of Gastrodia elata19.350
SRR5643528five period of Gastrodia elata16.250
SRR5643658five period of Gastrodia elata15.940
SRR5643659five period of Gastrodia elata14.980
SRR5643660five period of Gastrodia elata16.160
SRR5643661five period of Gastrodia elata16.810
SRR5643662five period of Gastrodia elata17.440
SRR5643663five period of Gastrodia elata14.410
SRR5643664five period of Gastrodia elata17.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.220
SRR6049655Rhizomagastrodiae_C368-T10_good_119.380
SRR6049656Rhizomagastrodiae_C368-T07_good_115.600
SRR6049657Rhizomagastrodiae_C368-T07_good_116.140
SRR6049658Rhizomagastrodiae_C368-T04_good_112.580
SRR6049659Rhizomagastrodiae_C368-T04_good_113.190
SRR6049660Rhizomagastrodiae_C368-T01_good_113.830
SRR6049661Rhizomagastrodiae_C368-T04_good_110.430
SRR6049662Rhizomagastrodiae_C368-T01_good_115.330
SRR6049663Rhizomagastrodiae_C368-T01_good_115.630
SRR6049664Rhizomagastrodiae_C368-T10_good_120.580
SRR6049665Rhizomagastrodiae_C368-T10_good_120.580
SRP279888GastroGastrodia elata tuber 12.73
JuvenJuvenile tuber12.74
Mother_GastroMother tuber of Gastrodia elata 8.72
Mother_JuvenMother tuber of Juvenile 8.88