Detail information of GWHGAAEX004148/evm.TU.scaffold_146.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00482.00E-66Transcription factor, Myb superfamily
nrgi|743795453|ref|XP_010924471.1|6.74E-73PREDICTED: transcription factor RAX2-like [Elaeis guineensis]
Swissprottr|Q9M2Y9|RAX3_ARATH5.00E-67Transcription factor RAX3
trEMBLtr|M0SK22|M0SK22_MUSAM3.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P01050_001}
TAIRAT3G496902.00E-66myb domain protein 84

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015111191491120547+
Transcript Sequence

Network for GWHGAAEX004148

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14621.40E-12
PF00249.30Myb_DNA-binding691111.20E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.920
SRR2545915Juvenile tuber29.960
SRP108465SRR5643513five period of Gastrodia elata76.920
SRR5643514five period of Gastrodia elata60.600
SRR5643515five period of Gastrodia elata47.380
SRR5643524five period of Gastrodia elata78.810
SRR5643525five period of Gastrodia elata6.070
SRR5643528five period of Gastrodia elata4.620
SRR5643658five period of Gastrodia elata8.290
SRR5643659five period of Gastrodia elata11.560
SRR5643660five period of Gastrodia elata9.280
SRR5643661five period of Gastrodia elata10.930
SRR5643662five period of Gastrodia elata9.310
SRR5643663five period of Gastrodia elata7.790
SRR5643664five period of Gastrodia elata4.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.290
SRR6049655Rhizomagastrodiae_C368-T10_good_164.130
SRR6049656Rhizomagastrodiae_C368-T07_good_143.910
SRR6049657Rhizomagastrodiae_C368-T07_good_140.710
SRR6049658Rhizomagastrodiae_C368-T04_good_147.460
SRR6049659Rhizomagastrodiae_C368-T04_good_153.240
SRR6049660Rhizomagastrodiae_C368-T01_good_147.690
SRR6049661Rhizomagastrodiae_C368-T04_good_159.210
SRR6049662Rhizomagastrodiae_C368-T01_good_132.430
SRR6049663Rhizomagastrodiae_C368-T01_good_132.130
SRR6049664Rhizomagastrodiae_C368-T10_good_144.760
SRR6049665Rhizomagastrodiae_C368-T10_good_144.760
SRP279888GastroGastrodia elata tuber 23.61
JuvenJuvenile tuber118.85
Mother_GastroMother tuber of Gastrodia elata 46.22
Mother_JuvenMother tuber of Juvenile 43.50