Detail information of GWHGAAEX004151/evm.TU.scaffold_146.54


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|217076277|ref|YP_002333993.1|2.00E-06fibronectin-binding protein [Thermosipho africanus TCF52B]
KOGKOG32722.00E-140Predicted coiled-coil protein
nrgi|719980151|ref|XP_010249702.1|1.18E-146PREDICTED: coiled-coil domain-containing protein 25-like isoform X1 [Nelumbo nucifera]
trEMBLtr|W1NRT1|W1NRT1_AMBTC5.00E-146Uncharacterized protein {ECO:0000313|EMBL:ERM98592.1}
TAIRAT5G115002.00E-140Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015111575321176197+
Transcript Sequence

Network for GWHGAAEX004151

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05670.12DUF81412994.60E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms74.750
SRR2545915Juvenile tuber49.310
SRP108465SRR5643513five period of Gastrodia elata58.240
SRR5643514five period of Gastrodia elata66.130
SRR5643515five period of Gastrodia elata63.890
SRR5643524five period of Gastrodia elata59.830
SRR5643525five period of Gastrodia elata124.750
SRR5643528five period of Gastrodia elata125.070
SRR5643658five period of Gastrodia elata157.590
SRR5643659five period of Gastrodia elata48.590
SRR5643660five period of Gastrodia elata51.220
SRR5643661five period of Gastrodia elata49.580
SRR5643662five period of Gastrodia elata45.420
SRR5643663five period of Gastrodia elata47.700
SRR5643664five period of Gastrodia elata48.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.920
SRR6049655Rhizomagastrodiae_C368-T10_good_161.990
SRR6049656Rhizomagastrodiae_C368-T07_good_153.090
SRR6049657Rhizomagastrodiae_C368-T07_good_149.620
SRR6049658Rhizomagastrodiae_C368-T04_good_154.830
SRR6049659Rhizomagastrodiae_C368-T04_good_163.600
SRR6049660Rhizomagastrodiae_C368-T01_good_148.120
SRR6049661Rhizomagastrodiae_C368-T04_good_147.660
SRR6049662Rhizomagastrodiae_C368-T01_good_150.430
SRR6049663Rhizomagastrodiae_C368-T01_good_151.100
SRR6049664Rhizomagastrodiae_C368-T10_good_162.120
SRR6049665Rhizomagastrodiae_C368-T10_good_162.120
SRP279888GastroGastrodia elata tuber 45.73
JuvenJuvenile tuber43.73
Mother_GastroMother tuber of Gastrodia elata 98.87
Mother_JuvenMother tuber of Juvenile 41.14