Detail information of GWHGAAEX004152/evm.TU.scaffold_146.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15890302|ref|NP_355974.1|1.00E-892-hydroxyacid dehydrogenase [Agrobacterium fabrum str. C58]
KOGKOG00691.00E-133Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily)
nrgi|672107213|ref|XP_008799958.1|2.02E-156PREDICTED: hydroxyphenylpyruvate reductase-like [Phoenix dactylifera]
Swissprottr|Q65CJ7|HPPR_PLESU1.00E-142Hydroxyphenylpyruvate reductase
trEMBLtr|A0A068TPR3|A0A068TPR3_COFCA2.00E-147Coffea canephora
TAIRAT1G798701.00E-133D-isomer specific 2-hydroxyacid dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015111763501180907-
Transcript Sequence

Network for GWHGAAEX004152

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00389.292-Hacid_dh493161.40E-21
PF02826.182-Hacid_dh_C1122851.10E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0051287Molecular FunctionNAD binding
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.440
SRR2545915Juvenile tuber10.070
SRP108465SRR5643513five period of Gastrodia elata22.850
SRR5643514five period of Gastrodia elata16.080
SRR5643515five period of Gastrodia elata26.550
SRR5643524five period of Gastrodia elata17.110
SRR5643525five period of Gastrodia elata21.620
SRR5643528five period of Gastrodia elata25.220
SRR5643658five period of Gastrodia elata16.050
SRR5643659five period of Gastrodia elata27.100
SRR5643660five period of Gastrodia elata23.680
SRR5643661five period of Gastrodia elata32.120
SRR5643662five period of Gastrodia elata36.700
SRR5643663five period of Gastrodia elata24.220
SRR5643664five period of Gastrodia elata29.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.360
SRR6049655Rhizomagastrodiae_C368-T10_good_114.580
SRR6049656Rhizomagastrodiae_C368-T07_good_119.460
SRR6049657Rhizomagastrodiae_C368-T07_good_117.350
SRR6049658Rhizomagastrodiae_C368-T04_good_117.430
SRR6049659Rhizomagastrodiae_C368-T04_good_114.470
SRR6049660Rhizomagastrodiae_C368-T01_good_117.390
SRR6049661Rhizomagastrodiae_C368-T04_good_118.530
SRR6049662Rhizomagastrodiae_C368-T01_good_121.790
SRR6049663Rhizomagastrodiae_C368-T01_good_119.910
SRR6049664Rhizomagastrodiae_C368-T10_good_125.650
SRR6049665Rhizomagastrodiae_C368-T10_good_125.650
SRP279888GastroGastrodia elata tuber 16.52
JuvenJuvenile tuber11.67
Mother_GastroMother tuber of Gastrodia elata 29.30
Mother_JuvenMother tuber of Juvenile 13.68