Detail information of GWHGAAEX004160/evm.TU.scaffold_146.64


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29453.00E-61Predicted RNA-binding protein
nrgi|743799501|ref|XP_010925494.1|1.26E-89PREDICTED: protein argonaute 2-like [Elaeis guineensis]
trEMBLtr|M0SM38|M0SM38_MUSAM2.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P08210_001}
TAIRAT4G175203.00E-61Hyaluronan / mRNA binding family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015114246081439790+
Transcript Sequence

Network for GWHGAAEX004160

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09598.9Stm1_N1748.10E-16
PF04774.14HABP4_PAI-RBP11642761.40E-26
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms309.810
SRR2545915Juvenile tuber357.550
SRP108465SRR5643513five period of Gastrodia elata619.690
SRR5643514five period of Gastrodia elata679.770
SRR5643515five period of Gastrodia elata568.030
SRR5643524five period of Gastrodia elata641.580
SRR5643525five period of Gastrodia elata567.480
SRR5643528five period of Gastrodia elata541.510
SRR5643658five period of Gastrodia elata517.260
SRR5643659five period of Gastrodia elata513.760
SRR5643660five period of Gastrodia elata516.560
SRR5643661five period of Gastrodia elata567.940
SRR5643662five period of Gastrodia elata461.970
SRR5643663five period of Gastrodia elata473.600
SRR5643664five period of Gastrodia elata497.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1519.790
SRR6049655Rhizomagastrodiae_C368-T10_good_1501.880
SRR6049656Rhizomagastrodiae_C368-T07_good_1591.700
SRR6049657Rhizomagastrodiae_C368-T07_good_1483.840
SRR6049658Rhizomagastrodiae_C368-T04_good_1425.790
SRR6049659Rhizomagastrodiae_C368-T04_good_1428.480
SRR6049660Rhizomagastrodiae_C368-T01_good_1496.390
SRR6049661Rhizomagastrodiae_C368-T04_good_1465.240
SRR6049662Rhizomagastrodiae_C368-T01_good_1609.260
SRR6049663Rhizomagastrodiae_C368-T01_good_1564.660
SRR6049664Rhizomagastrodiae_C368-T10_good_1745.570
SRR6049665Rhizomagastrodiae_C368-T10_good_1745.570
SRP279888GastroGastrodia elata tuber 437.83
JuvenJuvenile tuber543.64
Mother_GastroMother tuber of Gastrodia elata 282.24
Mother_JuvenMother tuber of Juvenile 282.19