Detail information of GWHGAAEX004165/evm.TU.scaffold_146.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800196|ref|XP_010925810.1|2.92E-146PREDICTED: U11/U12 small nuclear ribonucleoprotein 59 kDa protein-like [Elaeis guineensis]
Swissprottr|Q8VYD3|U1159_ARATH1.00E-105U11/U12 small nuclear ribonucleoprotein 59 kDa protein
trEMBLtr|B9I8R0|B9I8R0_POPTR3.00E-131Uncharacterized protein {ECO:0000313|EMBL:EEE99145.1}
TAIRAT2G462007.00E-82Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015115426551574732+
Transcript Sequence

Network for GWHGAAEX004165

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16021.4PDCD71374185.00E-16
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms61.790
SRR2545915Juvenile tuber36.870
SRP108465SRR5643513five period of Gastrodia elata26.810
SRR5643514five period of Gastrodia elata25.760
SRR5643515five period of Gastrodia elata21.710
SRR5643524five period of Gastrodia elata24.540
SRR5643525five period of Gastrodia elata38.530
SRR5643528five period of Gastrodia elata35.140
SRR5643658five period of Gastrodia elata61.370
SRR5643659five period of Gastrodia elata18.210
SRR5643660five period of Gastrodia elata21.930
SRR5643661five period of Gastrodia elata17.010
SRR5643662five period of Gastrodia elata15.390
SRR5643663five period of Gastrodia elata19.390
SRR5643664five period of Gastrodia elata20.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.260
SRR6049655Rhizomagastrodiae_C368-T10_good_141.230
SRR6049656Rhizomagastrodiae_C368-T07_good_132.110
SRR6049657Rhizomagastrodiae_C368-T07_good_163.550
SRR6049658Rhizomagastrodiae_C368-T04_good_152.380
SRR6049659Rhizomagastrodiae_C368-T04_good_170.700
SRR6049660Rhizomagastrodiae_C368-T01_good_146.220
SRR6049661Rhizomagastrodiae_C368-T04_good_149.030
SRR6049662Rhizomagastrodiae_C368-T01_good_123.720
SRR6049663Rhizomagastrodiae_C368-T01_good_126.040
SRR6049664Rhizomagastrodiae_C368-T10_good_122.820
SRR6049665Rhizomagastrodiae_C368-T10_good_122.820
SRP279888GastroGastrodia elata tuber 26.87
JuvenJuvenile tuber66.72
Mother_GastroMother tuber of Gastrodia elata 34.86
Mother_JuvenMother tuber of Juvenile 61.75