Detail information of GWHGAAEX004166/evm.TU.scaffold_146.70_evm.TU.scaffold_146.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|148656409|ref|YP_001276614.1|2.00E-29C4-dicarboxylate transporter/malic acid transport protein [Roseiflexus sp. RS-1]
nrgi|672164330|ref|XP_008802038.1|0PREDICTED: S-type anion channel SLAH2-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9FLV9|SLAH3_ARATH0S-type anion channel SLAH3
trEMBLtr|E0CUQ2|E0CUQ2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI22602.3}
TAIRAT5G240300SLAC1 homologue 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015115783371581336+
Transcript Sequence

Network for GWHGAAEX004166

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03595.16SLAC11114151.20E-49
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.270
SRR2545915Juvenile tuber0.700
SRP108465SRR5643513five period of Gastrodia elata0.510
SRR5643514five period of Gastrodia elata21.240
SRR5643515five period of Gastrodia elata7.310
SRR5643524five period of Gastrodia elata15.500
SRR5643525five period of Gastrodia elata1.460
SRR5643528five period of Gastrodia elata2.280
SRR5643658five period of Gastrodia elata0.740
SRR5643659five period of Gastrodia elata0.420
SRR5643660five period of Gastrodia elata0.570
SRR5643661five period of Gastrodia elata0.590
SRR5643662five period of Gastrodia elata1.150
SRR5643663five period of Gastrodia elata1.070
SRR5643664five period of Gastrodia elata0.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.910
SRR6049655Rhizomagastrodiae_C368-T10_good_13.950
SRR6049656Rhizomagastrodiae_C368-T07_good_14.100
SRR6049657Rhizomagastrodiae_C368-T07_good_12.920
SRR6049658Rhizomagastrodiae_C368-T04_good_11.920
SRR6049659Rhizomagastrodiae_C368-T04_good_11.410
SRR6049660Rhizomagastrodiae_C368-T01_good_11.170
SRR6049661Rhizomagastrodiae_C368-T04_good_11.440
SRR6049662Rhizomagastrodiae_C368-T01_good_19.400
SRR6049663Rhizomagastrodiae_C368-T01_good_12.860
SRR6049664Rhizomagastrodiae_C368-T10_good_14.800
SRR6049665Rhizomagastrodiae_C368-T10_good_14.800
SRP279888GastroGastrodia elata tuber 2.21
JuvenJuvenile tuber2.94
Mother_GastroMother tuber of Gastrodia elata 2.94
Mother_JuvenMother tuber of Juvenile 3.12