Detail information of GWHGAAEX004171/evm.TU.scaffold_146.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15071.00E-144Nucleosome assembly protein NAP-1
nrgi|731406496|ref|XP_010656182.1|8.18E-172PREDICTED: nucleosome assembly protein 1;4-like [Vitis vinifera]
Swissprottr|Q53WK4|NAP1B_ORYSJ2.00E-159Nucleosome assembly protein 1;2 (Precursor)
trEMBLtr|D7TB63|D7TB63_VITVI1.00E-168Putative uncharacterized protein {ECO:0000313|EMBL:CBI27898.3}
TAIRAT5G569501.00E-144nucleosome assembly protein 1;3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015117417921747234-
Transcript Sequence

Network for GWHGAAEX004171

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00956.17NAP623066.30E-86
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006334Biological Processnucleosome assembly
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2355.280
SRR2545915Juvenile tuber1806.040
SRP108465SRR5643513five period of Gastrodia elata477.710
SRR5643514five period of Gastrodia elata503.240
SRR5643515five period of Gastrodia elata481.540
SRR5643524five period of Gastrodia elata458.750
SRR5643525five period of Gastrodia elata735.910
SRR5643528five period of Gastrodia elata591.280
SRR5643658five period of Gastrodia elata625.540
SRR5643659five period of Gastrodia elata787.030
SRR5643660five period of Gastrodia elata899.150
SRR5643661five period of Gastrodia elata898.310
SRR5643662five period of Gastrodia elata1066.750
SRR5643663five period of Gastrodia elata900.820
SRR5643664five period of Gastrodia elata1137.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1767.610
SRR6049655Rhizomagastrodiae_C368-T10_good_1573.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1693.970
SRR6049657Rhizomagastrodiae_C368-T07_good_1924.540
SRR6049658Rhizomagastrodiae_C368-T04_good_1960.130
SRR6049659Rhizomagastrodiae_C368-T04_good_11076.770
SRR6049660Rhizomagastrodiae_C368-T01_good_1946.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1854.470
SRR6049662Rhizomagastrodiae_C368-T01_good_1597.270
SRR6049663Rhizomagastrodiae_C368-T01_good_1801.400
SRR6049664Rhizomagastrodiae_C368-T10_good_1552.600
SRR6049665Rhizomagastrodiae_C368-T10_good_1552.600
SRP279888GastroGastrodia elata tuber 1,144.14
JuvenJuvenile tuber461.24
Mother_GastroMother tuber of Gastrodia elata 319.53
Mother_JuvenMother tuber of Juvenile 304.86