Detail information of GWHGAAEX004175/evm.TU.scaffold_146.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268315973|ref|YP_003289692.1|2.00E-83phosphodiesterase I [Rhodothermus marinus DSM 4252]
KOGKOG26450Type I phosphodiesterase/nucleotide pyrophosphatase
nrgi|672139030|ref|XP_008793289.1|0PREDICTED: venom phosphodiesterase 2-like, partial [Phoenix dactylifera]
trEMBLtr|M0RK44|M0RK44_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P21190_001}
TAIRAT4G296800Alkaline-phosphatase-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015118014491803456+
Transcript Sequence

Network for GWHGAAEX004175

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01663.21Phosphodiest633911.50E-92
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.460
SRR2545915Juvenile tuber21.670
SRP108465SRR5643513five period of Gastrodia elata26.190
SRR5643514five period of Gastrodia elata30.600
SRR5643515five period of Gastrodia elata18.570
SRR5643524five period of Gastrodia elata35.960
SRR5643525five period of Gastrodia elata84.850
SRR5643528five period of Gastrodia elata47.410
SRR5643658five period of Gastrodia elata62.090
SRR5643659five period of Gastrodia elata21.320
SRR5643660five period of Gastrodia elata30.030
SRR5643661five period of Gastrodia elata21.000
SRR5643662five period of Gastrodia elata30.770
SRR5643663five period of Gastrodia elata40.670
SRR5643664five period of Gastrodia elata38.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.550
SRR6049655Rhizomagastrodiae_C368-T10_good_127.500
SRR6049656Rhizomagastrodiae_C368-T07_good_129.450
SRR6049657Rhizomagastrodiae_C368-T07_good_123.700
SRR6049658Rhizomagastrodiae_C368-T04_good_118.930
SRR6049659Rhizomagastrodiae_C368-T04_good_119.150
SRR6049660Rhizomagastrodiae_C368-T01_good_116.670
SRR6049661Rhizomagastrodiae_C368-T04_good_116.360
SRR6049662Rhizomagastrodiae_C368-T01_good_126.050
SRR6049663Rhizomagastrodiae_C368-T01_good_117.300
SRR6049664Rhizomagastrodiae_C368-T10_good_131.540
SRR6049665Rhizomagastrodiae_C368-T10_good_131.540
SRP279888GastroGastrodia elata tuber 30.39
JuvenJuvenile tuber12.90
Mother_GastroMother tuber of Gastrodia elata 9.22
Mother_JuvenMother tuber of Juvenile 13.04