Detail information of GWHGAAEX004179/evm.TU.scaffold_146.84
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|187735637|ref|YP_001877749.1| | 2.00E-08 | glycosyl transferase family protein [Akkermansia muciniphila ATCC BAA-835] |
| KOG | KOG2288 | 1.00E-92 | Galactosyltransferases |
| nr | gi|743769920|ref|XP_010915253.1| | 2.04E-122 | PREDICTED: probable beta-1,3-galactosyltransferase 12 isoform X4 [Elaeis guineensis] |
| Swissprot | tr|Q66GS2|B3GTC_ARATH | 1.00E-105 | Probable beta-1,3-galactosyltransferase 12 |
| trEMBL | tr|B9HDM8|B9HDM8_POPTR | 1.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:EEE92082.1} |
| TAIR | AT3G14960 | 1.00E-92 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000151 | 1889660 | 1893916 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004179
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01762.20 | Galactosyl_T | 108 | 282 | 7.50E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 8.220 |
| SRR2545915 | Juvenile tuber | 9.810 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.870 |
| SRR5643514 | five period of Gastrodia elata | 7.230 | |
| SRR5643515 | five period of Gastrodia elata | 8.380 | |
| SRR5643524 | five period of Gastrodia elata | 6.140 | |
| SRR5643525 | five period of Gastrodia elata | 8.510 | |
| SRR5643528 | five period of Gastrodia elata | 10.280 | |
| SRR5643658 | five period of Gastrodia elata | 9.210 | |
| SRR5643659 | five period of Gastrodia elata | 11.280 | |
| SRR5643660 | five period of Gastrodia elata | 10.780 | |
| SRR5643661 | five period of Gastrodia elata | 11.100 | |
| SRR5643662 | five period of Gastrodia elata | 11.590 | |
| SRR5643663 | five period of Gastrodia elata | 10.580 | |
| SRR5643664 | five period of Gastrodia elata | 9.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.060 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 5.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 8.420 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 6.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.770 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 10.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.060 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.38 |
| Juven | Juvenile tuber | 9.58 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 10.01 | |
| Mother_Juven | Mother tuber of Juvenile | 11.31 |