Gene detail

Detail information of GWHGAAEX004203/evm.TU.scaffold_146.112

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672107199\|ref\|XP_008799063.1\|	0	PREDICTED: uncharacterized protein LOC103713782 [Phoenix dactylifera]
trEMBL	tr\|B9H9B5\|B9H9B5_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEE93083.2}
TAIR	AT2G25740_1	1.00E-151	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000151	2562333	2568941	+

Transcript Sequence
>GWHTAAEX004203 CTGGATTACACGGGCATTTCCGTTCTAACGCTGCATATATTGGGCGGCTCTGTCTGAACGAAAGATCGCTAGCCCCTCGCACGGGAAAGCTCAGATAGGGGAAAACACACCGAAAGCTTCTTTCGGTTAATTTTTTAATAATTTTCTAGGTTTATTTCCTCGATCGGAGTCGAAGCAGGAAGCGGCAGCGGAAAGAGATTCTTCGACCAATGGCGGCGGCCTCGCAGGACTACCTGCAGACTGTGGTGAACTTTCTGTGGCAGCCTGATGAGTTCTCGTATCAGCATGTTTGGCCTCCGATGGCATTTGGGTGGAGGATCATTGCGGGATCCGTGATTGGTTTCTTCGGAGCTGCTTTCGGAAGTGTGGGAGGAGTGGGTGGCGGTGGGATTTTTGTTCCCATGCTCACTCTTATCATTGGATTCGATCCTAAATCTTCCACAGCCATTTCAAAATGTATGATTATGGGAGCAGCAGGATCCACTGTTTACTATAACCTCAAGCTTCGTCACCCGACCTTGGATATGCCCATCATAGACTATGATTTGGCTTTGTTGTTCCAACCAATGCTTATGCTTGGAATCAGTATTGGGGTAGCCTTCAATGTGCTCTTTGCTGATTGGATGGTGACTGTTCTTCTCATTATATTGTTTATAGGAACATCGACCAAGGCTTTCATGAAAGGGATAGAAACTTGGAAAAAGGAGACGATAATGAATAAGGAAGCTTCCAAGCAAGCAAATGCAAGTGGGAATGACGAAATAGATTATAAGCCTTTACCTGCTGAACCAGATGGCACTGCATCCAAGTTGCTGATTAAGGAGACTAGGAAAGAAGAGGTTTCAGTTATGGAGAATGTTTGCTGGAAGGAACTTGGTCTTCTAATTGTGGTTTGGATTGCATTCCTTGTATTGCAAGTCACAAAGGAATACACTGTTACCTGCTCAAAATGGTACTGGATCTTGAATTTGCTACAGATCCCAGTATCTGTAGGGGTGACTTTATATGAAGCCGTTAGCTTGTACAAAGGAACGAGAGTAATTGCATCCAAAGGAACCGAAGGAACAGATTGGAAGGTCATTAAGCTCTTCATGTACTGCCTTGTCGGTATTCTCGCTGGTATGGTAGGTGGGCTGCTTGGTCTTGGTGGAGGGTTCATTCTTGGTCCTCTCTTCCTCGAACTTGGAATTCCTCCCCAGGTCTCAAGCGCTACAGCAACCTTTGCCATGACATTCTCCTCTTCTATGTCTGTGATAGAGTACTACTTGCTTAAGAGATTCCCTGTCCCATATGCCCTCTACTTTGGTGTCATTGCTACGATGGCTGCCTTCATTGGACAGCATGCAGTAAGGAAGCTTATCAATATACTGGGAAGAGCCTCTCTCATAATCTTTATCCTGGCATTTACCATCTTTGTTAGTGCAGTCTCACTGGGTGGAGTTGGCATTTCAAACATGATTCAGAAGATGCATAATAGTGATTATATGGGATTTGATAACTTGTGCATGTATGATCCTTAGCAGCGAAGTTGTTAAGATTAGTGGGCACTAATTCATGATATCAGTCACCTGTTCTTTGTTCTTTATTCTTACTTTTTTTTTATTTTGTTTCTCGCTGATGTATTAATTTTGCAATTTTGATAGTTCAATAAAGCATCTATTTTCAAAAAAATGATATGATTGTGTAGCTGTTCAATGCTAAATGAGAACTCTGATCCAGTGAAAACTATTTCTTATGTAATGAACAATTGCTGAATGATTAATAGTTCGAGTCATGTTACTTCTGATGTCTAGCAATTAGTATTGCTCCCCACTATGAATCAATAATGTAAGAAGCCTTTTAAGCATCAAGACTAGGAGTTAAAACATACATTAATCTTCAAAGTCATTAGACATCACAATAAAGGCGTTAGTTAACTCAATATCCAACAAACTCATGAAAAGAAAAAGATTTGCCGCTCGG

Network for GWHGAAEX004203

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01925.18	TauE	42	158	4.70E-11
PF01925.18	TauE	288	399	7.90E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.880
SRP064423	SRR2545915	Juvenile tuber	8.850
SRP108465	SRR5643513	five period of Gastrodia elata	4.630
	SRR5643514	five period of Gastrodia elata	11.260
	SRR5643515	five period of Gastrodia elata	6.680
	SRR5643524	five period of Gastrodia elata	15.080
	SRR5643525	five period of Gastrodia elata	1.930
	SRR5643528	five period of Gastrodia elata	1.540
	SRR5643658	five period of Gastrodia elata	1.440
	SRR5643659	five period of Gastrodia elata	0.490
	SRR5643660	five period of Gastrodia elata	0.070
	SRR5643661	five period of Gastrodia elata	0.070
	SRR5643662	five period of Gastrodia elata	0.070
	SRR5643663	five period of Gastrodia elata	0.110
	SRR5643664	five period of Gastrodia elata	0.200
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.050
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.260
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.830
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.340
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.860
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.860
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.700
SRP279888	Gastro	Gastrodia elata tuber	0.46
	Juven	Juvenile tuber	1.55
	Mother_Gastro	Mother tuber of Gastrodia elata	1.66
	Mother_Juven	Mother tuber of Juvenile	2.64