Detail information of GWHGAAEX004216/evm.TU.scaffold_147.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|336177585|ref|YP_004582960.1|1.00E-53FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Frankia symbiont of Datisca glomerata]
KOGKOG24959.00E-161NADH-dehydrogenase (ubiquinone)
nrgi|695015971|ref|XP_009394878.1|3.43E-173PREDICTED: apoptosis-inducing factor homolog B-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ST62|NDB1_SOLTU6.00E-12External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial (Precursor)
trEMBLtr|M0SKE0|M0SKE0_MUSAM1.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P02230_001}
TAIRAT3G441909.00E-161FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000150285238286722+
Transcript Sequence

Network for GWHGAAEX004216

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_2102752.00E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22745AIFM2 p53 signaling pathway map04115

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1200.780
SRR2545915Juvenile tuber1032.480
SRP108465SRR5643513five period of Gastrodia elata309.350
SRR5643514five period of Gastrodia elata182.120
SRR5643515five period of Gastrodia elata1349.870
SRR5643524five period of Gastrodia elata534.540
SRR5643525five period of Gastrodia elata2170.980
SRR5643528five period of Gastrodia elata7127.810
SRR5643658five period of Gastrodia elata3048.370
SRR5643659five period of Gastrodia elata834.070
SRR5643660five period of Gastrodia elata335.370
SRR5643661five period of Gastrodia elata566.750
SRR5643662five period of Gastrodia elata889.140
SRR5643663five period of Gastrodia elata449.490
SRR5643664five period of Gastrodia elata959.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1307.640
SRR6049655Rhizomagastrodiae_C368-T10_good_1119.070
SRR6049656Rhizomagastrodiae_C368-T07_good_1191.160
SRR6049657Rhizomagastrodiae_C368-T07_good_1249.460
SRR6049658Rhizomagastrodiae_C368-T04_good_1278.760
SRR6049659Rhizomagastrodiae_C368-T04_good_1419.150
SRR6049660Rhizomagastrodiae_C368-T01_good_1822.910
SRR6049661Rhizomagastrodiae_C368-T04_good_1334.580
SRR6049662Rhizomagastrodiae_C368-T01_good_1281.140
SRR6049663Rhizomagastrodiae_C368-T01_good_1603.530
SRR6049664Rhizomagastrodiae_C368-T10_good_1193.130
SRR6049665Rhizomagastrodiae_C368-T10_good_1193.130
SRP279888GastroGastrodia elata tuber 248.52
JuvenJuvenile tuber72.71
Mother_GastroMother tuber of Gastrodia elata 4,428.40
Mother_JuvenMother tuber of Juvenile 6,529.37