Detail information of GWHGAAEX004225/evm.TU.scaffold_147.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27853.00E-152C2H2-type Zn-finger protein
nrgi|743767786|ref|XP_010914164.1|0PREDICTED: zinc finger protein 622-like [Elaeis guineensis]
trEMBLtr|M0TBI7|M0TBI7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P30420_001}
TAIRAT2G245003.00E-152Zinc finger protein 622

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000150650373686408+
Transcript Sequence

Network for GWHGAAEX004225

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12756.6zf-C2H2_21922942.70E-25
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.000
SRR2545915Juvenile tuber53.300
SRP108465SRR5643513five period of Gastrodia elata62.170
SRR5643514five period of Gastrodia elata72.550
SRR5643515five period of Gastrodia elata63.450
SRR5643524five period of Gastrodia elata63.770
SRR5643525five period of Gastrodia elata77.150
SRR5643528five period of Gastrodia elata83.770
SRR5643658five period of Gastrodia elata82.450
SRR5643659five period of Gastrodia elata59.720
SRR5643660five period of Gastrodia elata60.980
SRR5643661five period of Gastrodia elata54.250
SRR5643662five period of Gastrodia elata57.030
SRR5643663five period of Gastrodia elata56.990
SRR5643664five period of Gastrodia elata52.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.840
SRR6049655Rhizomagastrodiae_C368-T10_good_176.880
SRR6049656Rhizomagastrodiae_C368-T07_good_176.910
SRR6049657Rhizomagastrodiae_C368-T07_good_163.750
SRR6049658Rhizomagastrodiae_C368-T04_good_189.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1106.980
SRR6049660Rhizomagastrodiae_C368-T01_good_171.100
SRR6049661Rhizomagastrodiae_C368-T04_good_181.210
SRR6049662Rhizomagastrodiae_C368-T01_good_171.830
SRR6049663Rhizomagastrodiae_C368-T01_good_181.570
SRR6049664Rhizomagastrodiae_C368-T10_good_192.990
SRR6049665Rhizomagastrodiae_C368-T10_good_192.990
SRP279888GastroGastrodia elata tuber 72.38
JuvenJuvenile tuber75.62
Mother_GastroMother tuber of Gastrodia elata 78.53
Mother_JuvenMother tuber of Juvenile 75.20