Detail information of GWHGAAEX004230/evm.TU.scaffold_147.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296133478|ref|YP_003640725.1|5.00E-21serine/threonine protein kinase [Thermincola potens JR]
KOGKOG11871.00E-135Serine/threonine protein kinase
nrgi|672167288|ref|XP_008803599.1|1.26E-172PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Phoenix dactylifera]
Swissprottr|Q5XF57|Y5576_ARATH2.00E-120Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBLtr|M0RKT2|M0RKT2_MUSAM1.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P23570_001}
TAIRAT2G188901.00E-135Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000150746142749914-
Transcript Sequence

Network for GWHGAAEX004230

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase773412.80E-39
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VI

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.030
SRR2545915Juvenile tuber28.640
SRP108465SRR5643513five period of Gastrodia elata18.100
SRR5643514five period of Gastrodia elata25.860
SRR5643515five period of Gastrodia elata17.920
SRR5643524five period of Gastrodia elata19.360
SRR5643525five period of Gastrodia elata15.330
SRR5643528five period of Gastrodia elata8.140
SRR5643658five period of Gastrodia elata14.710
SRR5643659five period of Gastrodia elata13.410
SRR5643660five period of Gastrodia elata12.720
SRR5643661five period of Gastrodia elata12.380
SRR5643662five period of Gastrodia elata15.660
SRR5643663five period of Gastrodia elata16.170
SRR5643664five period of Gastrodia elata16.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.440
SRR6049655Rhizomagastrodiae_C368-T10_good_120.650
SRR6049656Rhizomagastrodiae_C368-T07_good_116.460
SRR6049657Rhizomagastrodiae_C368-T07_good_118.000
SRR6049658Rhizomagastrodiae_C368-T04_good_118.180
SRR6049659Rhizomagastrodiae_C368-T04_good_122.610
SRR6049660Rhizomagastrodiae_C368-T01_good_116.540
SRR6049661Rhizomagastrodiae_C368-T04_good_113.690
SRR6049662Rhizomagastrodiae_C368-T01_good_115.540
SRR6049663Rhizomagastrodiae_C368-T01_good_116.930
SRR6049664Rhizomagastrodiae_C368-T10_good_121.880
SRR6049665Rhizomagastrodiae_C368-T10_good_121.880
SRP279888GastroGastrodia elata tuber 10.22
JuvenJuvenile tuber22.23
Mother_GastroMother tuber of Gastrodia elata 15.97
Mother_JuvenMother tuber of Juvenile 10.91