Detail information of GWHGAAEX004235/evm.TU.scaffold_147.33
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|212639427|ref|YP_002315947.1| | 2.00E-85 | Sulfite reductase subunit alpha [Anoxybacillus flavithermus WK1] |
| KOG | KOG1158 | 0 | NADP/FAD dependent oxidoreductase |
| nr | gi|695077167|ref|XP_009385909.1| | 0 | PREDICTED: NADPH--cytochrome P450 reductase-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q05001|NCPR_CATRO | 0 | NADPH--cytochrome P450 reductase |
| trEMBL | tr|M0U6C2|M0U6C2_MUSAM | 0 | NADPH--cytochrome P450 reductase {ECO:0000256|PIRNR:PIRNR000208} |
| TAIR | AT4G30210 | 0 | P450 reductase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000150 | 891213 | 915201 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX004235
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00258.24 | Flavodoxin_1 | 132 | 275 | 1.50E-32 |
| PF00667.19 | FAD_binding_1 | 333 | 554 | 4.40E-70 |
| PF00175.20 | NAD_binding_1 | 591 | 701 | 2.80E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0010181 | Molecular Function | FMN binding |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0003958 | Molecular Function | NADPH-hemoprotein reductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 317.920 |
| SRR2545915 | Juvenile tuber | 266.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 118.610 |
| SRR5643514 | five period of Gastrodia elata | 98.780 | |
| SRR5643515 | five period of Gastrodia elata | 94.040 | |
| SRR5643524 | five period of Gastrodia elata | 101.560 | |
| SRR5643525 | five period of Gastrodia elata | 200.970 | |
| SRR5643528 | five period of Gastrodia elata | 164.500 | |
| SRR5643658 | five period of Gastrodia elata | 283.260 | |
| SRR5643659 | five period of Gastrodia elata | 173.700 | |
| SRR5643660 | five period of Gastrodia elata | 234.490 | |
| SRR5643661 | five period of Gastrodia elata | 175.260 | |
| SRR5643662 | five period of Gastrodia elata | 212.810 | |
| SRR5643663 | five period of Gastrodia elata | 210.930 | |
| SRR5643664 | five period of Gastrodia elata | 292.000 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 246.670 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 128.400 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 184.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 288.620 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 262.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 309.940 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 257.750 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 244.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 152.520 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 193.590 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 122.230 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 122.230 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 167.89 |
| Juven | Juvenile tuber | 136.50 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 88.64 | |
| Mother_Juven | Mother tuber of Juvenile | 89.46 |